Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   LUW75_RS09950 Genome accession   NZ_CP094264
Coordinates   2198713..2199834 (+) Length   373 a.a.
NCBI ID   WP_168438873.1    Uniprot ID   A0AA44DD21
Organism   Streptomyces sp. MRC013     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2193713..2204834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUW75_RS09935 (LUW75_09935) - 2194350..2195093 (+) 744 WP_250337613.1 hypothetical protein -
  LUW75_RS09940 (LUW75_09940) - 2195101..2196783 (-) 1683 WP_250335282.1 hypothetical protein -
  LUW75_RS09945 (LUW75_09945) radA/sms 2197172..2198572 (+) 1401 WP_250335283.1 DNA repair protein RadA Machinery gene
  LUW75_RS09950 (LUW75_09950) disA 2198713..2199834 (+) 1122 WP_168438873.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  LUW75_RS09955 (LUW75_09955) - 2199865..2200709 (-) 845 Protein_1974 hypothetical protein -
  LUW75_RS09960 (LUW75_09960) - 2200878..2201603 (+) 726 WP_250335284.1 phosphatase PAP2 family protein -
  LUW75_RS09965 (LUW75_09965) - 2201672..2202585 (+) 914 Protein_1976 A/G-specific adenine glycosylase -
  LUW75_RS09970 (LUW75_09970) - 2202793..2203335 (+) 543 WP_250335285.1 SigE family RNA polymerase sigma factor -
  LUW75_RS09975 (LUW75_09975) - 2203367..2204035 (+) 669 WP_250335286.1 hypothetical protein -
  LUW75_RS09980 (LUW75_09980) cseB 2204055..2204747 (+) 693 WP_250335287.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40187.03 Da        Isoelectric Point: 4.9406

>NTDB_id=577296 LUW75_RS09950 WP_168438873.1 2198713..2199834(+) (disA) [Streptomyces sp. MRC013]
MAANDRATPGKSGGGSGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLRE
LCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVISVSQSMRLIALYVDGERRVLEESAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHAELLELPTVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGAI
IERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=577296 LUW75_RS09950 WP_168438873.1 2198713..2199834(+) (disA) [Streptomyces sp. MRC013]
GTGGCAGCCAACGACCGGGCAACACCCGGAAAGTCGGGCGGAGGCTCCGGCAACGAAGCGCTGATGCGCGCGTCCCTCAG
CGCGGTCGCCCCCGGCACGGCGCTGAGGGACGGACTGGAGCGCATCCTCCGCGGCAACACGGGCGGTCTGATCGTCCTCG
GCATGGACAGGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTACTGGACGTGGAGTTCACCGCGACCCGCCTGCGCGAG
CTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTCCGCGCCGGCGTCCAGCTGGTCCCCGA
CGCGTCGATCCCGACCGAGGAGACCGGCACGCGGCACCGCACGGCGGACCGGGTGTCCAGGCAGTGCGGCTTCCCGGTGA
TCTCCGTGTCGCAGTCGATGCGTCTGATCGCCCTGTACGTGGACGGCGAGCGCCGCGTCCTGGAGGAGTCCGCCGCGATC
CTCTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTGGCCGGGACGCTCTCCGC
GCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTGGCACAGCGCCTGGAGATGGTCCGCCGGATCGCCA
CGGAGATCGCGGAGTACGTCGTCGAGCTGGGTACGGACGGCCGCCTCCTCGCCCTCCAGCTGGACGAGCTGATCGCGGGC
GTCGAGCCGGAGCGGGAGCTGGTGGTGCGGGACTACGTGCCCGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCGGAGGC
GCTGACGGAGCTGGACGCGCTGTCCCACGCCGAGCTGCTGGAGCTGCCGACGGTGGCCCGGGCGCTCGGCTACAGCGGTT
CGCCGGAGACGCTGGACTCGGCGGTCTCGCCGCGCGGCTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCCATC
ATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTGCAGGCCGTCGACGG
CGTCGGCGAGGCGCGCGCCCGCAGCGTCCGGGAGGGCCTGTCTCGGCTCGCCGAGTCGTCGATCCTGGAGCGGTACGTCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA44DD21

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.783

0.445