Detailed information NTG0577285

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KQ248_RS19305
• Genome accession: NZ_CP076683
• Coordinates: 4239091..4241316 (-)
• Length: 741 a.a.
• NCBI ID: WP_216706883.1
• Uniprot ID: -
• Organism: Stutzerimonas zhaodongensis strain A252
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4234091..4246316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ248_RS19270 (KQ248_19270)	murB	4234479..4235498 (-)	1020	WP_128119423.1	UDP-N-acetylmuramate dehydrogenase	-
KQ248_RS19275 (KQ248_19275)	-	4235495..4235959 (-)	465	WP_128119424.1	low molecular weight protein-tyrosine-phosphatase	-
KQ248_RS19280 (KQ248_19280)	kdsB	4235962..4236726 (-)	765	WP_128119425.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KQ248_RS19285 (KQ248_19285)	-	4236723..4236908 (-)	186	WP_128119426.1	Trm112 family protein	-
KQ248_RS19290 (KQ248_19290)	lpxK	4236958..4237962 (-)	1005	WP_216706882.1	tetraacyldisaccharide 4'-kinase	-
KQ248_RS19295 (KQ248_19295)	-	4237962..4238390 (-)	429	WP_045428858.1	ExbD/TolR family protein	-
KQ248_RS19300 (KQ248_19300)	-	4238387..4239019 (-)	633	WP_045428860.1	MotA/TolQ/ExbB proton channel family protein	-
KQ248_RS19305 (KQ248_19305)	comA	4239091..4241316 (-)	2226	WP_216706883.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KQ248_RS19310 (KQ248_19310)	-	4241497..4242012 (+)	516	WP_045428862.1	DUF2062 domain-containing protein	-
KQ248_RS19315 (KQ248_19315)	-	4242021..4243268 (-)	1248	WP_128119427.1	lipoprotein-releasing ABC transporter permease subunit	-
KQ248_RS19320 (KQ248_19320)	lolD	4243268..4243981 (-)	714	WP_413818135.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
KQ248_RS19325 (KQ248_19325)	-	4243974..4245221 (-)	1248	WP_128119428.1	lipoprotein-releasing ABC transporter permease subunit	-
KQ248_RS19330 (KQ248_19330)	-	4245322..4245894 (+)	573	WP_128119429.1	PilZ domain-containing protein	-
KQ248_RS19335 (KQ248_19335)	-	4245898..4246203 (+)	306	WP_046161980.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80580.44 Da
• Isoelectric Point: 9.7876

>NTDB_id=577285 KQ248_RS19305 WP_216706883.1 4239091..4241316(-) (comA) [Stutzerimonas zhaodongensis strain A252]
MRTAMLALAAGLLLLRFLPQLPPVSALPFILAAGLVLLPFRWRAIGCFLCGFAWACLSAHEALDDRLSTERDGRTFWLEG
TVSDLPDVRGGVVRFELVNISSRHSDLPSRLRLAWYGGPRMQAGERWRLAAKLKKPRGLVNPHSFDYEAWLLARRIGASG
TIKAGERVSVAAGGPGWRDQLRQRLLAVDAQGRSGAIAALVVGDDSGLSTTDWRTLQDTGTVHLMVISGQHVGMLAGLLY
GLVALLARWGIWPRRVAWLPCACSLALAGALAYGWLAGFEVPVQRALVMVALVLLWRLRYRHLGVWLPLLIALDAVLLLD
PLVGLQSGFWLSFLAVALLALVFRGRLGSWSWWRALGRAQWSMALGLLPILLALGLPVSLSGPIANLFAVPLVSAVIVPL
SLLGTSLLWLPGVGEPVLWVAGGLLAILFDALQWLAGWQPAWLPASLPFWAWLLVALGTLLILLPPGIPFRALGLVFLLP
LLFPPIDKPAVGQAEVWLFDVGQGLAVLVRTHDHALLYDTGPRYGDFDIGERVVLPSLRTLGVSGLDLLILSHADSDHAG
GASAIQRQIRAGRVVSGEPARLPASLGAEMCRSGDAWEWNGVRFTLWQSPRARDGNQSSCVLLIEASGERLLLTGDIDVD
TEQLLLTSDMPLEVDWLLVPHHGSRSSSSTAFIEATGAGGALISRSLHNAFGHPHPEVLQRLHTAGARLYDTAELGAIRI
RLGRFEPVLGLRTKRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=577285 KQ248_RS19305 WP_216706883.1 4239091..4241316(-) (comA) [Stutzerimonas zhaodongensis strain A252]
ATGCGTACAGCGATGCTGGCGCTGGCAGCAGGCCTTCTACTGCTGCGTTTTTTACCGCAATTACCGCCTGTCTCAGCGTT
GCCGTTCATATTGGCGGCGGGCCTGGTCTTGCTTCCGTTCCGCTGGCGAGCGATCGGTTGTTTTCTCTGCGGGTTTGCAT
GGGCGTGTCTCAGCGCCCACGAGGCGTTGGATGACCGCCTTTCAACCGAGCGTGATGGCCGTACGTTCTGGCTCGAAGGT
ACGGTGAGCGACCTGCCCGATGTTCGTGGCGGTGTGGTGCGTTTTGAACTGGTCAATATATCGTCCCGGCATAGCGACCT
GCCGTCCAGGCTTCGCTTGGCATGGTACGGCGGCCCCAGGATGCAGGCGGGTGAGCGATGGCGGCTCGCTGCCAAATTGA
AAAAGCCACGGGGCTTGGTTAATCCCCACTCTTTCGATTACGAGGCCTGGCTCTTGGCGCGGCGGATCGGTGCCAGCGGC
ACGATCAAAGCCGGAGAGCGCGTGTCGGTGGCAGCGGGAGGGCCGGGATGGCGCGATCAGCTGCGGCAACGCTTGTTGGC
GGTCGATGCTCAGGGCCGCTCCGGCGCCATTGCCGCGCTGGTGGTGGGCGATGATAGCGGCCTGTCCACCACGGATTGGC
GCACGCTCCAGGACACCGGAACCGTTCATTTGATGGTTATATCGGGGCAGCACGTGGGCATGCTGGCCGGCTTGCTTTAC
GGCCTGGTGGCATTGTTAGCGCGTTGGGGAATCTGGCCGCGGCGCGTCGCCTGGTTGCCCTGCGCTTGTAGCCTGGCCTT
GGCTGGAGCGCTTGCGTACGGCTGGCTGGCGGGTTTTGAAGTCCCGGTCCAGCGGGCGCTGGTGATGGTCGCTCTGGTGC
TCCTGTGGCGTTTGCGGTATCGGCATTTGGGTGTCTGGCTGCCACTGCTGATCGCCCTCGATGCTGTACTGCTGTTGGAT
CCGCTAGTAGGGCTGCAGTCGGGCTTCTGGTTGTCTTTCCTGGCGGTGGCGCTTCTTGCGCTGGTGTTCCGCGGCCGGCT
TGGTAGCTGGAGTTGGTGGCGCGCATTAGGCCGTGCACAGTGGAGCATGGCCCTGGGCCTGTTGCCGATCCTGCTGGCGC
TAGGCTTGCCGGTTAGCCTGAGTGGGCCGATTGCCAACCTCTTTGCAGTCCCACTGGTCAGCGCGGTAATCGTTCCGCTG
TCGTTGTTAGGCACGTCCTTGTTGTGGTTGCCAGGCGTTGGCGAGCCGGTGCTATGGGTGGCCGGTGGGTTATTGGCAAT
TCTCTTTGATGCGCTGCAATGGCTTGCCGGCTGGCAGCCGGCGTGGCTACCAGCGTCATTGCCGTTTTGGGCTTGGCTGC
TGGTTGCGCTTGGGACGCTGCTGATCCTGCTTCCGCCCGGAATACCGTTTCGGGCGTTGGGTCTGGTGTTTCTGCTACCG
CTGCTGTTTCCACCCATCGACAAGCCGGCAGTAGGGCAGGCGGAAGTCTGGCTGTTCGACGTCGGTCAGGGGCTCGCTGT
GCTGGTCCGCACGCATGACCATGCGCTGCTGTACGACACAGGGCCGCGATATGGTGACTTCGACATCGGCGAGCGGGTTG
TATTGCCGTCGTTGCGCACGCTGGGGGTGAGCGGTCTCGATTTGCTGATTCTCAGCCATGCCGATAGCGACCATGCGGGT
GGCGCTTCGGCGATCCAGCGACAGATACGAGCTGGGCGAGTGGTCAGCGGTGAGCCGGCAAGACTGCCTGCTTCGCTAGG
CGCCGAGATGTGCCGCTCCGGAGACGCCTGGGAATGGAATGGGGTCCGCTTTACGCTTTGGCAATCACCACGGGCCAGAG
ATGGAAACCAGTCCTCCTGCGTGCTGCTGATCGAGGCGAGCGGCGAACGTCTGCTGCTCACTGGCGACATCGACGTGGAT
ACCGAGCAACTGCTCCTGACGAGCGACATGCCGCTTGAGGTCGATTGGTTGTTGGTGCCACATCACGGCAGTCGCAGCTC
GTCGTCAACCGCATTCATCGAGGCAACAGGAGCCGGAGGTGCGCTCATCTCGCGCAGCTTGCATAACGCATTCGGACACC
CGCATCCGGAAGTGCTGCAGCGGCTGCACACTGCCGGGGCGCGACTTTATGACACGGCAGAGCTAGGAGCGATTCGGATT
CGCCTCGGCCGTTTTGAGCCTGTTCTAGGATTACGTACCAAGCGTCGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-464)

• Domain of unknown function (DUF4131) (DUF4131) (14-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-682)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	69.633	95.547	0.665
comA	Ralstonia pseudosolanacearum GMI1000	35.35	100	0.402