Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   KQU62_RS03480 Genome accession   NZ_CP076660
Coordinates   693282..693851 (-) Length   189 a.a.
NCBI ID   WP_123090070.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SG511 Berlin     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 688282..698851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQU62_RS03460 (KQU62_03460) - 689785..691143 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  KQU62_RS03465 (KQU62_03465) - 691282..692793 (+) 1512 WP_000414169.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  KQU62_RS03480 (KQU62_03480) comK/comK1 693282..693851 (-) 570 WP_123090070.1 competence protein ComK Regulator
  KQU62_RS03485 (KQU62_03485) - 694061..694279 (+) 219 WP_000876825.1 IDEAL domain-containing protein -
  KQU62_RS03490 (KQU62_03490) - 694360..695346 (-) 987 WP_000668820.1 lipoate--protein ligase -
  KQU62_RS03495 (KQU62_03495) - 695545..695721 (+) 177 WP_000214898.1 YkvS family protein -
  KQU62_RS03500 (KQU62_03500) - 695736..696338 (+) 603 WP_001033867.1 CPBP family glutamic-type intramembrane protease -
  KQU62_RS13575 - 696654..696716 (+) 63 WP_240785570.1 putative holin-like toxin -
  KQU62_RS03510 (KQU62_03510) - 696886..696987 (+) 102 WP_001790623.1 hypothetical protein -
  KQU62_RS03515 (KQU62_03515) - 697009..697269 (+) 261 WP_223200471.1 lactococcin 972 family bacteriocin -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22597.84 Da        Isoelectric Point: 9.6091

>NTDB_id=577102 KQU62_RS03480 WP_123090070.1 693282..693851(-) (comK/comK1) [Staphylococcus aureus strain SG511 Berlin]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKPRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=577102 KQU62_RS03480 WP_123090070.1 693282..693851(-) (comK/comK1) [Staphylococcus aureus strain SG511 Berlin]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGTGAAATAATTCGGTTTGACAAACCGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCACCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

99.471

100

0.995
  comK/comK1 Staphylococcus aureus N315

99.471

100

0.995