Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KPL75_RS19985 Genome accession   NZ_CP076653
Coordinates   3837328..3837504 (+) Length   58 a.a.
NCBI ID   WP_193645655.1    Uniprot ID   -
Organism   Bacillus sp. NP247     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3832328..3842504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPL75_RS19965 (KPL75_19960) clpC 3832655..3835255 (+) 2601 WP_219917467.1 ATP-dependent chaperone ClpB Regulator
  KPL75_RS19970 (KPL75_19965) - 3835287..3835469 (-) 183 WP_001211111.1 YjzD family protein -
  KPL75_RS19975 (KPL75_19970) - 3835626..3836360 (+) 735 WP_219917468.1 alpha/beta hydrolase -
  KPL75_RS19980 (KPL75_19975) - 3836418..3837263 (+) 846 WP_219917469.1 NAD(P)-dependent oxidoreductase -
  KPL75_RS19985 (KPL75_19980) comZ 3837328..3837504 (+) 177 WP_193645655.1 ComZ family protein Regulator
  KPL75_RS19990 (KPL75_19985) fabH 3837767..3838699 (+) 933 WP_219917470.1 beta-ketoacyl-ACP synthase III -
  KPL75_RS19995 (KPL75_19990) fabF 3838731..3839969 (+) 1239 WP_219917471.1 beta-ketoacyl-ACP synthase II -
  KPL75_RS20000 (KPL75_19995) - 3840084..3840875 (+) 792 WP_219917472.1 DUF2268 domain-containing protein -
  KPL75_RS20005 (KPL75_20000) - 3841014..3841760 (+) 747 WP_219917473.1 YjbA family protein -
  KPL75_RS20010 (KPL75_20005) - 3841876..3842073 (-) 198 WP_219917474.1 hypothetical protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6549.71 Da        Isoelectric Point: 4.4797

>NTDB_id=577017 KPL75_RS19985 WP_193645655.1 3837328..3837504(+) (comZ) [Bacillus sp. NP247]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMDEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=577017 KPL75_RS19985 WP_193645655.1 3837328..3837504(+) (comZ) [Bacillus sp. NP247]
ATGAATGAAAAAAGTATGCAATTTTTACAAATTGCAATGAAACATTTACCAGAAGCTAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCGCAGCCAGTGTTAGAGCTATTGATGAAAGTAATGGATGAAGCATATGAGCTTGGGA
AAGCTGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586