Detailed information NTG0577016

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: KPL75_RS19965
• Genome accession: NZ_CP076653
• Coordinates: 3832655..3835255 (+)
• Length: 866 a.a.
• NCBI ID: WP_219917467.1
• Uniprot ID: -
• Organism: Bacillus sp. NP247
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3827655..3840255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KPL75_RS19925 (KPL75_19920)	-	3828146..3828409 (+)	264	WP_219917464.1	hypothetical protein	-
KPL75_RS19930 (KPL75_19925)	prsA	3828465..3829310 (-)	846	WP_219917465.1	peptidylprolyl isomerase PrsA	-
KPL75_RS19935 (KPL75_19930)	-	3829441..3829572 (-)	132	WP_001120851.1	DUF3941 domain-containing protein	-
KPL75_RS19940 (KPL75_19935)	-	3829673..3830530 (+)	858	WP_219917466.1	YitT family protein	-
KPL75_RS19945 (KPL75_19940)	-	3830557..3830754 (-)	198	WP_098778083.1	DUF3813 domain-containing protein	-
KPL75_RS19950 (KPL75_19945)	-	3830755..3830895 (-)	141	WP_002170819.1	hypothetical protein	-
KPL75_RS19955 (KPL75_19950)	-	3831002..3831811 (-)	810	WP_105584269.1	Cof-type HAD-IIB family hydrolase	-
KPL75_RS19960 (KPL75_19955)	-	3832303..3832482 (+)	180	WP_002117000.1	YjzC family protein	-
KPL75_RS19965 (KPL75_19960)	clpC	3832655..3835255 (+)	2601	WP_219917467.1	ATP-dependent chaperone ClpB	Regulator
KPL75_RS19970 (KPL75_19965)	-	3835287..3835469 (-)	183	WP_001211111.1	YjzD family protein	-
KPL75_RS19975 (KPL75_19970)	-	3835626..3836360 (+)	735	WP_219917468.1	alpha/beta hydrolase	-
KPL75_RS19980 (KPL75_19975)	-	3836418..3837263 (+)	846	WP_219917469.1	NAD(P)-dependent oxidoreductase	-
KPL75_RS19985 (KPL75_19980)	comZ	3837328..3837504 (+)	177	WP_193645655.1	ComZ family protein	Regulator
KPL75_RS19990 (KPL75_19985)	fabH	3837767..3838699 (+)	933	WP_219917470.1	beta-ketoacyl-ACP synthase III	-
KPL75_RS19995 (KPL75_19990)	fabF	3838731..3839969 (+)	1239	WP_219917471.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97582.71 Da
• Isoelectric Point: 5.1983

>NTDB_id=577016 KPL75_RS19965 WP_219917467.1 3832655..3835255(+) (clpC) [Bacillus sp. NP247]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQEGLTVRIFQKMNVDIEALKQGVESLIKKKPSVTGSGAE
AGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLLAFSEEKGDINQLFTKFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLKGHFRPEFLNRVDEIILFKPLTRNEIKGIVDKIVQELQGRLADRHIS
LELTEPAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=577016 KPL75_RS19965 WP_219917467.1 3832655..3835255(+) (clpC) [Bacillus sp. NP247]
ATGGACTTAAATCAAATGACAACAAAAACACAGGAAGCGATTATGAGTGCTCAATCTTTAGCGGTATCTCATCATCATCA
AGAAGTAGATACTGTTCATTTATTGCTTACATTATTAGAGCAGCAAGAAGGATTAACAGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAGCAAGGTGTAGAAAGTTTAATTAAGAAAAAGCCTTCTGTAACTGGAAGCGGGGCAGAG
GCAGGGAAATTATATGTAACAGGTGCTTTGCAACAACTGCTTGTGAGAGCAGGAAAAGAAGCGGAAAAATTACAAGATGA
TTATATTTCAATAGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTATTTACAAAATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCTGAAGTAAGAGCGGGGAAAATTGACCCTGTAATTGGCCGAGA
TAGTGAAATTCGCCGCGTGATCCGCATTCTTTCACGTAAAACGAAAAATAACCCTGTTTTAATCGGGGAACCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGATTAGCGCAGCGTATTGTGAAAAAAGATGTCCCAGAAGGATTAAAAGATCGAACAATT
TTCGCTTTAGATATGAGTGCACTTGTGGCTGGAGCTAAATTCCGCGGTGAGTTTGAAGAGCGCCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATCGTCGGCGCTGGTAAAACAGAAG
GAGCAATGGATGCAGGAAATATGTTAAAACCCATGCTAGCGCGTGGTGAACTGCATTGTATCGGGGCAACGACATTAGAT
GAATACCGTAAATATATTGAGAAAGATCCAGCGTTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAGCCAACTGTTGA
GGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG
TAGCGGCATCTGTTTTATCAGATCGATATATTTCAGATCGTTTTTTGCCCGATAAAGCAATTGATCTTGTTGATGAAGCT
TGTGCAACAATTCGAACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTGGAAAT
TGAAGAAGCTGCTCTTGGGAAAGAAAAGGACTTAGGTAGTCAAGAGCGCCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTAGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCATAAAGTGCGTGACTTGCGTGAA
CATTTAGAGCGCTTGCGCCGTGAGTTAGAAGAAGCAGAAGGAAATTACGATTTAAATAAAGCAGCTGAGCTTCGCCACGG
GAAAATTCCAGCTATCGAAAAAGAGTTAAAAGAAGCGGAAGAGATGGGGGCACATAATAAACAAGAGAATCGTTTATTAC
GCGAGGAAGTAAGTGAAGAAGAAATTGCAGACATTGTTTCAAGGTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT
GAACGTGAGAAATTATTACGTCTTGAACAAATTTTATCAGAGCGTGTTATCGGTCAAGAGGAAGCGGTAAGCCTTGTATC
AGACGCAGTACTTCGTGCTCGTGCTGGCATTAAAGATCCGAATCGTCCAATTGGTTCATTCATTTTCTTAGGTCCTACAG
GTGTTGGTAAAACTGAGCTTGCAAAAACGTTAGCACAAACGTTATTTGACAGTGAAGAGCAAATGATTCGTATCGATATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTTGGATATGAAGAAGGCGGACA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGACGATGGACGTATTACAGATTCACAAGGACGTACAGTAGACTTTAAAAACACGGTTATT
ATTATGACTTCAAATATTGGATCTGCTCACTTATTAGAAGGGCTAGAAGAAGATGGCTCTATTAAAGAAGAGTCAAGAGA
ACTTGTAATGGGACAATTAAAAGGACATTTCCGACCAGAATTCTTAAACCGTGTCGATGAAATTATTTTATTCAAACCTC
TTACAAGGAATGAAATTAAAGGTATTGTTGATAAGATTGTACAAGAATTACAAGGGCGTTTAGCAGATCGTCACATATCA
TTAGAATTGACGGAACCTGCAAAAGAATTTGTTGTAGAAGCTGGATTCGATCCGATGTACGGAGCTCGTCCGTTAAAACG
ATACGTACAGCGTCAAGTTGAGACAAAATTAGCGAGAGAATTGATTGCAGGAACGATTACTGATAATAGTCACGTAGTTG
TCGATGTAGAAAATAATGAATTAGTTGTTCATGTAAAGTAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• AAA lid domain (AAA_lid_9) (345-447)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.657	100	0.482
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	40.092	100	0.404
clpC	Lactococcus lactis subsp. cremoris KW2	47.265	82.333	0.389