Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   KNV97_RS02380 Genome accession   NZ_CP076642
Coordinates   533492..534586 (-) Length   364 a.a.
NCBI ID   WP_218562033.1    Uniprot ID   A0A975U717
Organism   Vibrio ostreae strain OG9-811     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 528492..539586
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNV97_RS02370 (KNV97_02370) - 530175..530699 (+) 525 WP_136487665.1 hypothetical protein -
  KNV97_RS02375 (KNV97_02375) luxQ 530884..533472 (-) 2589 WP_136487664.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ Regulator
  KNV97_RS02380 (KNV97_02380) luxP 533492..534586 (-) 1095 WP_218562033.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  KNV97_RS02385 (KNV97_02385) - 534997..535296 (-) 300 WP_168797065.1 GIY-YIG nuclease family protein -
  KNV97_RS02390 (KNV97_02390) - 535296..535934 (-) 639 WP_218562034.1 YceH family protein -
  KNV97_RS02395 (KNV97_02395) - 536411..536728 (+) 318 WP_136487659.1 DUF496 family protein -
  KNV97_RS02400 (KNV97_02400) glpK 536866..538404 (-) 1539 WP_218562035.1 glycerol kinase GlpK -

Sequence

Protein


Download         Length: 364 a.a.        Molecular weight: 41394.80 Da        Isoelectric Point: 5.4426

>NTDB_id=576808 KNV97_RS02380 WP_218562033.1 533492..534586(-) (luxP) [Vibrio ostreae strain OG9-811]
MKKALFLSFLLGFTPVATSYSSQLLSGYWHYQEFLNANPQQKQLTDQLSRAVRQAPVAMAGEQQKPVSISVVFPGQQVSD
YWVRNIKAFEMRMEELGIEYQINQVFTRPNLDTRQQSLSLMEALKNNSDYLIFTLDTTRHRKFIEHVLSSSPTKLILQNI
TTPVRDWDGRQPMMYVGFDHEMGALQLAHYYREHVPKGSKYSVLYFSEGYVSDARGDTFIENMERSGDYHLASSYYTKAT
EESGYEAALNIVKNDPDIKFIYACSTDVALGAVKALKELNRNDIMVNGWGGGSAELQALEEGTLDVTIMRMNDDTGIAMA
EVIKRDLEGLAVPTVFSGDFELVSHDDKQQISLFKQRAFRYSDR

Nucleotide


Download         Length: 1095 bp        

>NTDB_id=576808 KNV97_RS02380 WP_218562033.1 533492..534586(-) (luxP) [Vibrio ostreae strain OG9-811]
ATGAAGAAGGCGCTCTTTCTCTCTTTTTTACTTGGTTTCACCCCGGTAGCTACGTCCTATTCATCTCAATTGTTGAGCGG
ATACTGGCATTATCAGGAATTCTTAAATGCTAACCCACAGCAAAAGCAGTTGACTGATCAGTTGTCACGCGCCGTTCGCC
AGGCACCAGTTGCAATGGCAGGGGAACAACAAAAGCCCGTATCCATTTCCGTTGTTTTTCCCGGCCAGCAGGTTTCAGAC
TATTGGGTTCGCAATATAAAAGCGTTCGAAATGCGTATGGAAGAACTGGGGATTGAATATCAGATCAATCAGGTCTTTAC
CCGGCCAAATCTGGACACACGTCAGCAAAGTCTCTCTCTGATGGAAGCGTTAAAAAACAATTCTGACTATTTAATTTTTA
CCCTGGATACGACACGGCACCGAAAGTTTATTGAACATGTACTAAGTTCTTCGCCAACTAAGTTGATCCTGCAAAATATT
ACGACGCCAGTCCGCGACTGGGACGGCAGACAGCCAATGATGTATGTTGGCTTTGATCATGAAATGGGTGCACTGCAACT
GGCCCATTATTATCGTGAGCATGTTCCCAAAGGCAGCAAGTATTCTGTACTGTATTTCTCCGAGGGCTATGTGAGCGATG
CGCGTGGTGATACCTTTATTGAGAATATGGAGCGCAGCGGTGATTATCATCTTGCTTCATCGTATTACACCAAGGCGACA
GAAGAGAGCGGTTATGAGGCTGCTCTGAATATTGTCAAAAATGATCCCGATATTAAATTCATCTACGCCTGTTCGACAGA
TGTGGCTTTGGGGGCGGTGAAGGCCCTGAAAGAACTCAACCGGAACGACATTATGGTGAACGGCTGGGGCGGCGGTTCGG
CAGAGCTGCAGGCGCTGGAGGAAGGCACTTTGGATGTCACCATTATGCGCATGAATGATGATACTGGTATAGCGATGGCC
GAAGTGATTAAACGTGATCTCGAAGGGCTGGCTGTCCCGACGGTCTTTTCCGGCGATTTTGAGCTCGTTTCTCATGATGA
TAAGCAGCAGATCAGCTTATTCAAACAACGTGCGTTTCGGTATTCCGATCGTTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(70-329)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

68.493

100

0.687