Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxQ   Type   Regulator
Locus tag   KNV97_RS02375 Genome accession   NZ_CP076642
Coordinates   530884..533472 (-) Length   862 a.a.
NCBI ID   WP_136487664.1    Uniprot ID   -
Organism   Vibrio ostreae strain OG9-811     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 525884..538472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNV97_RS02355 (KNV97_02355) modB 526946..527665 (-) 720 WP_136487668.1 molybdate ABC transporter permease subunit -
  KNV97_RS02360 (KNV97_02360) modA 527646..528419 (-) 774 WP_218562031.1 molybdate ABC transporter substrate-binding protein -
  KNV97_RS02365 (KNV97_02365) - 528421..529902 (-) 1482 WP_218562032.1 cobyric acid synthase -
  KNV97_RS02370 (KNV97_02370) - 530175..530699 (+) 525 WP_136487665.1 hypothetical protein -
  KNV97_RS02375 (KNV97_02375) luxQ 530884..533472 (-) 2589 WP_136487664.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ Regulator
  KNV97_RS02380 (KNV97_02380) luxP 533492..534586 (-) 1095 WP_218562033.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  KNV97_RS02385 (KNV97_02385) - 534997..535296 (-) 300 WP_168797065.1 GIY-YIG nuclease family protein -
  KNV97_RS02390 (KNV97_02390) - 535296..535934 (-) 639 WP_218562034.1 YceH family protein -
  KNV97_RS02395 (KNV97_02395) - 536411..536728 (+) 318 WP_136487659.1 DUF496 family protein -
  KNV97_RS02400 (KNV97_02400) glpK 536866..538404 (-) 1539 WP_218562035.1 glycerol kinase GlpK -

Sequence


Protein


Download         Length: 862 a.a.        Molecular weight: 96891.26 Da        Isoelectric Point: 4.7777

>NTDB_id=576807 KNV97_RS02375 WP_136487664.1 530884..533472(-) (luxQ) [Vibrio ostreae strain OG9-811]
MNIRSSTVKQKRRIATFISRAIVAVLGALTLAVLFQSYQISSRLISQEVARSATQTASLIQNLFNYRLATLQIHQDSSAK
NSSFIDALSSDSGAALDQYFLSVDQLELSNTPDIRFITDLKELVWEDGNAQFYGIQSREMNKIIRRVSVSNNWHLVQTPS
LLGMTYLLVRRSPVVNSTTGEVIGFLFVSIVLNNNFALIETIRDSSNSQNLILAVGSEVLASTLNGDESYSAFDVIEDGL
SEGLYDKNMVSKAVLDVEGVPTYLEVYSVQSNQNALSLRDNYYFWMIFALVAMIAVSMLIRWWLQRRIESEIEGLMTYTH
NVAERGLDGFFPGSKIYEFDHFGRTLEHTFQRLSQQEKQFEDLFTFALSPTILWTSDGEMIRMNPAAESHFRPKDANQLS
LFNVLKAQLVPQIKLAARGEILNEVNTEVDGRVFLWNLSPIIVENRVESIITQGQDVTTIAEAEKQSRIARNEAEETARV
RADFLAKMSHELRTPLNGILGVSQLLKRTVKSKEQAEQVNVLCSSGEHLLAVLNDILDFSKIEQGKFRIQKVDFRLVDVV
SAIERIYGPLCREKQLELQLESNIDEDIFINGDQVRLNQVLFNLLNNAVKFTHDGSISVQLELNQDVSPTKLKIVVLDTG
IGIRDQDLAAIFEPFVQAESTNTREYGGSGLGLTIVHSLIEMLGGSIEVSSQFGVGTRFDIELPVEIVANEVREADTQVG
KSRYDLFDDTVQVLMVEDNHTNAFIAKAFCNKYGMNVEWVTDGLKAIERVKQQHYDMILMDNQLPYLDGVDATRIIKHEM
GLPIPVYACTADGMLETQEAFMQAGAEYVIVKPIKEDTLHQALVNFQLNRSGYNAPVKKNYS

Nucleotide


Download         Length: 2589 bp        

>NTDB_id=576807 KNV97_RS02375 WP_136487664.1 530884..533472(-) (luxQ) [Vibrio ostreae strain OG9-811]
GTGAACATCCGGTCCAGTACAGTAAAACAGAAAAGAAGAATTGCGACCTTTATCAGTCGTGCCATCGTGGCGGTGCTGGG
CGCCCTCACGCTGGCTGTGCTGTTCCAAAGCTATCAAATCAGCAGCCGGTTAATCTCACAGGAAGTGGCACGCAGTGCTA
CCCAGACCGCGAGCTTGATCCAGAATCTGTTTAATTACCGTCTTGCTACGTTGCAGATTCACCAGGACAGTAGTGCTAAA
AACAGCAGTTTTATTGATGCGTTAAGCAGCGATTCTGGCGCTGCACTTGATCAGTATTTTCTCAGCGTGGACCAACTGGA
GTTGAGTAATACTCCGGACATCCGTTTTATCACTGATTTGAAAGAGTTGGTCTGGGAAGACGGTAACGCCCAGTTTTACG
GCATTCAAAGCCGAGAAATGAATAAAATTATCCGTCGGGTCTCGGTGAGTAACAATTGGCATTTGGTGCAGACCCCGTCT
TTACTGGGTATGACTTATTTGTTAGTACGTCGCTCGCCCGTCGTCAACAGTACGACAGGTGAAGTGATAGGCTTTCTGTT
TGTTAGCATAGTGCTTAACAATAATTTTGCCCTGATTGAAACCATTCGTGATAGCAGCAATTCACAGAATTTAATTCTGG
CTGTTGGCTCTGAAGTTTTAGCGTCAACTCTCAACGGGGACGAGTCCTACTCGGCGTTTGATGTGATTGAAGATGGCCTG
AGTGAAGGGCTGTACGATAAAAACATGGTCAGTAAAGCGGTACTAGATGTCGAAGGTGTGCCTACTTATCTTGAGGTGTA
TTCGGTACAGAGCAATCAAAATGCGCTGAGCTTACGCGACAACTACTATTTCTGGATGATTTTTGCTCTGGTGGCGATGA
TCGCGGTCTCTATGCTAATTCGCTGGTGGTTGCAACGTCGTATTGAATCTGAAATTGAAGGCTTGATGACCTATACCCAC
AACGTTGCTGAGCGCGGTTTGGACGGATTCTTTCCCGGTTCTAAAATTTACGAATTTGACCATTTTGGCCGCACGTTGGA
ACACACTTTCCAGCGTTTGTCACAGCAGGAAAAGCAATTTGAGGATCTGTTTACTTTCGCTTTATCTCCGACCATTTTGT
GGACCAGCGATGGTGAGATGATCCGGATGAATCCGGCTGCTGAGTCTCACTTCAGGCCAAAGGATGCTAATCAGTTGTCT
CTGTTCAATGTGTTAAAGGCACAACTGGTACCACAGATAAAGCTGGCCGCACGAGGTGAAATCCTCAATGAGGTGAACAC
CGAAGTCGACGGTCGGGTTTTCTTGTGGAACCTGTCGCCGATTATTGTGGAGAATCGGGTCGAGTCCATCATTACTCAGG
GCCAGGATGTCACTACGATTGCTGAGGCAGAAAAACAGAGCCGCATTGCCCGCAATGAAGCAGAAGAGACCGCGCGAGTA
CGAGCCGATTTTCTGGCCAAGATGAGCCATGAATTGCGCACGCCGCTTAACGGCATTCTCGGTGTATCTCAGTTACTGAA
ACGCACGGTGAAATCAAAAGAACAAGCGGAGCAGGTCAACGTTCTGTGCAGTAGTGGTGAACATTTGCTGGCGGTACTGA
ACGACATCCTCGACTTTTCCAAGATTGAACAAGGCAAGTTTCGTATTCAAAAAGTGGATTTCCGGCTGGTTGATGTGGTT
TCAGCGATTGAAAGAATCTACGGGCCGCTATGCAGAGAGAAACAGCTGGAACTGCAACTTGAGAGTAATATTGATGAAGA
CATTTTCATCAATGGCGATCAGGTTCGCTTAAATCAGGTGCTGTTTAACCTGCTCAACAATGCGGTGAAGTTCACCCATG
ATGGTTCTATCTCCGTTCAGCTTGAGCTGAATCAGGATGTGTCACCGACCAAGCTGAAAATTGTCGTGCTCGATACCGGT
ATTGGGATACGCGATCAGGATCTGGCTGCTATTTTCGAACCTTTTGTGCAGGCGGAGTCGACCAATACCCGCGAATATGG
CGGTAGCGGCCTGGGGCTCACTATTGTTCACAGTCTGATTGAAATGCTGGGCGGCAGCATTGAGGTTTCTTCTCAGTTTG
GCGTCGGCACCCGTTTTGATATCGAATTACCGGTAGAGATTGTTGCCAATGAAGTGCGGGAAGCTGACACCCAGGTTGGT
AAATCCCGCTATGATCTTTTCGACGATACTGTTCAGGTATTGATGGTGGAAGATAACCATACCAACGCCTTCATTGCCAA
GGCTTTTTGTAATAAATACGGCATGAATGTGGAGTGGGTGACCGATGGCCTCAAAGCGATAGAGAGGGTCAAACAGCAGC
ATTACGATATGATTCTGATGGATAACCAACTGCCTTATCTGGACGGGGTCGATGCTACCCGGATCATCAAACATGAAATG
GGGTTACCGATCCCGGTTTATGCCTGTACTGCGGATGGAATGCTGGAGACACAAGAAGCGTTTATGCAGGCGGGCGCCGA
GTACGTAATTGTAAAACCGATCAAAGAAGATACCCTGCATCAGGCACTGGTGAATTTCCAGCTCAATCGTTCAGGGTATA
ACGCGCCGGTTAAAAAGAATTATTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxQ Vibrio cholerae strain A1552

61.844

99.42

0.615