Detailed information NTG0057676

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: LEUCM_RS05905
• Genome accession: NZ_AP017929
• Coordinates: 1173389..1175701 (+)
• Length: 770 a.a.
• NCBI ID: WP_025016402.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1168389..1180701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LEUCM_RS05880 (LACBS_01155)	-	1169187..1169582 (+)	396	WP_025016398.1	LPXTG cell wall anchor domain-containing protein	-
LEUCM_RS05885 (LACBS_01156)	-	1169572..1171407 (+)	1836	WP_056936422.1	WxL domain-containing protein	-
LEUCM_RS05890 (LACBS_01157)	-	1171458..1171784 (-)	327	WP_016265359.1	heavy metal-binding domain-containing protein	-
LEUCM_RS05895 (LACBS_01158)	-	1171801..1172166 (-)	366	WP_025016401.1	DUF1304 domain-containing protein	-
LEUCM_RS05900 (LACBS_01159)	galE	1172252..1173244 (-)	993	WP_011374975.1	UDP-glucose 4-epimerase GalE	-
LEUCM_RS05905 (LACBS_01160)	recJ	1173389..1175701 (+)	2313	WP_025016402.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
LEUCM_RS05910 (LACBS_01161)	-	1175725..1176243 (+)	519	WP_011374973.1	adenine phosphoribosyltransferase	-
LEUCM_RS05915 (LACBS_01162)	dinR/lexA	1176378..1176992 (-)	615	WP_011374972.1	transcriptional repressor LexA	Regulator
LEUCM_RS05920 (LACBS_01163)	-	1177127..1177369 (+)	243	WP_025016405.1	DUF896 domain-containing protein	-
LEUCM_RS05925 (LACBS_01164)	-	1177450..1177680 (+)	231	WP_011374970.1	YneF family protein	-
LEUCM_RS05930 (LACBS_01165)	-	1177822..1179567 (+)	1746	WP_025016406.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 770 a.a.
• Molecular weight: 84839.63 Da
• Isoelectric Point: 4.5390

>NTDB_id=57676 LEUCM_RS05905 WP_025016402.1 1173389..1175701(+) (recJ) [Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13]
MEAQYEWQLKPVPTEDELQTITKDNPLPKAAAQLLWQRGLRDAEQINDFMNPNVGQLHDPYALHDMQKAIDRIQEAIVNG
EKITIYGDYDADGITSTTLMKETLDDLGADVEVYVPNRFKDGYGPNLEAYKRLIENGTQLIVTVDNGVSGLEPIAYAQEH
GVDVVVTDHHELPSELPNAVAIVHPRHPEGQYPFGELCGVGVAFKVATALLEEIPYDKLDLAAIGTVCDIVPLVDENRTL
VSLGLQQLQNTDRPGLVALCQSAGLEQATLDATNIGFGIGPRLNAIGRLGDATLGVQLLTTLDDEEAVEQAQFIEQQNKK
RQGLVQEITATAMTIAETPENQASATLVIAHEGWHEGVLGIVASHVVEQTGKPTLVLTIDPETGLAKGSGRSVTAFHLFK
ALDAHRELLVHFGGHHMAVGLTAKVDQLALIQTAMNEYAQVNQLDLTGRQPLPVDLALTLADITPDLYQALQQLAPFGSD
NPEPLIELSAPQLADVKQIGADQKHLKMMAVDQQQQLAVLAFNKGALMPDLTAAEDVKLVGSLSENTWRGQTTLQLMVKD
LATSGQVVLDQRSNRLTKQLFQSTGDYVFFNDKMREQLQSYLPAGSQALLATDEQVATSQELIVVDEPADLTAFEQFYQQ
QQAAKLSLIFYAKHSAYLEGMPTKQQFATFLVYLRKHPNIEKARLAELAAYLKLQLPLMIFMLQVFFDLGFVRIERGLIT
AELQPEKHALESAPSYQKRLAKIEMEKQLVYSTFTEVKDWLATLPAVANR

Nucleotide

• Length: 2313 bp

>NTDB_id=57676 LEUCM_RS05905 WP_025016402.1 1173389..1175701(+) (recJ) [Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13]
TTGGAAGCACAATATGAATGGCAATTAAAACCAGTACCAACTGAGGATGAATTACAAACAATTACAAAAGACAATCCGCT
ACCTAAGGCTGCGGCCCAACTTTTGTGGCAACGTGGCTTGCGGGATGCAGAGCAGATCAATGATTTTATGAATCCCAATG
TCGGTCAACTTCACGATCCATACGCTTTGCATGATATGCAAAAGGCGATTGATCGAATTCAAGAAGCGATTGTGAACGGC
GAAAAAATTACGATTTATGGCGATTATGACGCGGACGGGATCACAAGTACCACTTTGATGAAGGAAACTTTAGACGACTT
AGGTGCCGATGTTGAAGTCTATGTGCCTAATCGTTTTAAGGATGGCTACGGTCCTAATTTAGAAGCTTATAAACGCTTGA
TTGAAAATGGCACCCAATTAATTGTGACCGTCGATAACGGGGTGAGTGGCTTAGAACCAATCGCTTACGCGCAAGAACAC
GGTGTTGACGTGGTCGTGACCGATCACCATGAATTACCATCAGAATTACCCAACGCAGTGGCGATTGTGCATCCCAGACA
TCCAGAAGGGCAATATCCTTTTGGCGAACTCTGTGGGGTCGGTGTGGCGTTTAAAGTGGCGACTGCTTTATTAGAAGAGA
TTCCTTACGATAAATTAGATTTAGCCGCAATCGGGACGGTTTGTGATATCGTCCCCTTAGTCGATGAAAACCGGACGTTG
GTTAGTTTAGGCTTACAACAATTACAAAATACCGATCGACCAGGTTTGGTCGCATTGTGTCAATCAGCTGGCTTAGAACA
AGCGACACTAGATGCCACTAACATTGGGTTTGGGATTGGTCCCCGTTTAAACGCAATTGGTCGTTTAGGTGATGCGACCC
TTGGTGTGCAATTGTTAACGACGCTTGATGACGAAGAAGCGGTTGAACAGGCCCAATTTATTGAACAACAAAATAAAAAA
CGCCAAGGGCTAGTGCAAGAAATTACGGCAACGGCAATGACAATTGCTGAAACACCGGAAAATCAAGCGAGTGCCACCTT
AGTTATTGCCCACGAAGGTTGGCATGAAGGGGTTCTAGGGATTGTGGCTAGTCATGTTGTTGAACAGACCGGTAAACCAA
CCTTAGTCTTGACGATTGACCCGGAAACTGGCTTAGCTAAAGGCTCTGGCCGTAGTGTGACAGCTTTCCATTTATTTAAA
GCGTTAGATGCACACCGTGAATTATTGGTTCATTTTGGTGGCCATCACATGGCAGTTGGCTTGACCGCTAAGGTTGATCA
ATTAGCGTTGATTCAAACTGCAATGAACGAGTATGCGCAAGTTAATCAGTTAGATTTAACAGGACGCCAACCATTACCAG
TTGATTTGGCGCTGACGCTAGCTGATATTACGCCTGATTTATATCAAGCATTGCAACAACTGGCACCTTTTGGCAGTGAT
AATCCAGAACCGTTGATTGAACTTAGCGCGCCCCAGTTAGCCGATGTCAAACAAATCGGTGCTGATCAGAAGCATTTGAA
GATGATGGCGGTCGATCAACAACAACAATTAGCAGTTTTAGCTTTCAATAAAGGGGCTTTGATGCCCGATTTAACTGCCG
CTGAAGATGTGAAATTAGTCGGGAGTTTGAGTGAGAATACTTGGCGTGGCCAGACAACGTTGCAATTAATGGTAAAAGAC
CTTGCTACAAGTGGGCAAGTCGTACTTGATCAACGCAGCAATCGTCTGACGAAGCAATTATTCCAATCAACAGGCGACTA
CGTCTTTTTTAATGATAAAATGCGCGAGCAACTGCAGTCTTATTTACCGGCAGGGAGTCAGGCGCTGTTAGCGACCGATG
AACAAGTTGCTACTAGCCAAGAGCTAATTGTAGTTGATGAACCAGCTGATTTAACTGCTTTTGAACAATTTTATCAACAA
CAACAGGCCGCTAAATTAAGCTTGATTTTTTATGCTAAACACTCTGCTTATTTAGAAGGAATGCCGACAAAACAACAGTT
TGCGACTTTCTTAGTTTACTTGCGGAAACATCCAAATATTGAAAAAGCGCGGTTAGCAGAATTAGCAGCGTATTTAAAAT
TACAATTACCGTTAATGATTTTCATGTTGCAGGTGTTTTTTGACCTCGGATTTGTTAGAATAGAACGTGGTCTGATTACG
GCCGAGTTACAACCTGAAAAGCATGCACTGGAAAGTGCACCAAGTTATCAAAAACGATTAGCTAAAATTGAAATGGAAAA
ACAGCTTGTTTATTCAACCTTTACCGAGGTGAAAGACTGGCTAGCAACTCTCCCAGCAGTAGCAAATCGCTAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-761)

• DHH family (DHH) (82-226)

• RecJ OB domain (RecJ_OB) (454-560)

• DHHA1 domain (DHHA1) (318-437)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	40.604	98.831	0.401
recJ	Bacillus subtilis subsp. subtilis str. 168	37.371	100	0.377