Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | TOL_RS00660 | Genome accession | NC_020888 |
| Coordinates | 146548..147816 (+) | Length | 422 a.a. |
| NCBI ID | WP_015485330.1 | Uniprot ID | M5DLE5 |
| Organism | Thalassolituus oleivorans MIL-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 141548..152816
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TOL_RS00635 (TOL_0131) | - | 141719..142624 (-) | 906 | WP_158505899.1 | lysophospholipid acyltransferase family protein | - |
| TOL_RS00640 (TOL_0132) | - | 142760..144406 (+) | 1647 | WP_015485326.1 | response regulator | - |
| TOL_RS00645 (TOL_0133) | - | 144426..145085 (+) | 660 | WP_015485327.1 | sensor histidine kinase | - |
| TOL_RS00650 (TOL_0134) | rsmD | 145097..145651 (-) | 555 | WP_015485328.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| TOL_RS00655 (TOL_0135) | - | 145648..146412 (-) | 765 | WP_015485329.1 | hypothetical protein | - |
| TOL_RS00660 (TOL_0136) | pilA | 146548..147816 (+) | 1269 | WP_015485330.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| TOL_RS00665 (TOL_0137) | ftsE | 147835..148551 (+) | 717 | WP_015485331.1 | cell division ATP-binding protein FtsE | - |
| TOL_RS00670 (TOL_0138) | ftsX | 148544..149587 (+) | 1044 | WP_015485332.1 | permease-like cell division protein FtsX | - |
| TOL_RS00675 (TOL_0140) | rpoH | 149713..150582 (+) | 870 | WP_015485334.1 | RNA polymerase sigma factor RpoH | - |
| TOL_RS00680 (TOL_0141) | - | 150658..151053 (-) | 396 | WP_015485335.1 | acyl-CoA thioesterase | - |
| TOL_RS00685 (TOL_0142) | - | 151146..152522 (-) | 1377 | WP_015485336.1 | TRAP transporter large permease | - |
Sequence
Protein
Download Length: 422 a.a. Molecular weight: 46016.87 Da Isoelectric Point: 4.7984
>NTDB_id=57624 TOL_RS00660 WP_015485330.1 146548..147816(+) (pilA) [Thalassolituus oleivorans MIL-1]
MFDFFKRKKDKNKSEKPESAELDSALEQTLEPISSQPVISEIEPQPVDVITEPEKAMIKPPVVEEMVVEPTPVEIPPVVA
PNELDITPSSAVAEINPDVMVDVPVKAVAEEKKGFFGRIRSGLSKTRSGFTDGLASLLLGKKEIDDDLMDDLETQLIMAD
VGVEATTEIIKRLTARVSRKELKDSDALYEALIDELQDMLAVSQKPLVIDSSKKPYVILMVGINGVGKTTTIGKLAKQFQ
KRGKSVMLAAGDTFRAAAVEQLQVWGERNNVPVVAQHTGADSASVLFDALQAAQARKVDVLIADTAGRLHNKDNLMQELE
KVVRVMQKLDPSAPHEVMLVLDAGTGQNAINQTKHFLQSVGVTGLTLTKLDGTAKGGIIFALAKQFGLPVRYIGVGEGID
DLRPFNADEFTRALFRHDTKED
MFDFFKRKKDKNKSEKPESAELDSALEQTLEPISSQPVISEIEPQPVDVITEPEKAMIKPPVVEEMVVEPTPVEIPPVVA
PNELDITPSSAVAEINPDVMVDVPVKAVAEEKKGFFGRIRSGLSKTRSGFTDGLASLLLGKKEIDDDLMDDLETQLIMAD
VGVEATTEIIKRLTARVSRKELKDSDALYEALIDELQDMLAVSQKPLVIDSSKKPYVILMVGINGVGKTTTIGKLAKQFQ
KRGKSVMLAAGDTFRAAAVEQLQVWGERNNVPVVAQHTGADSASVLFDALQAAQARKVDVLIADTAGRLHNKDNLMQELE
KVVRVMQKLDPSAPHEVMLVLDAGTGQNAINQTKHFLQSVGVTGLTLTKLDGTAKGGIIFALAKQFGLPVRYIGVGEGID
DLRPFNADEFTRALFRHDTKED
Nucleotide
Download Length: 1269 bp
>NTDB_id=57624 TOL_RS00660 WP_015485330.1 146548..147816(+) (pilA) [Thalassolituus oleivorans MIL-1]
ATGTTTGATTTTTTTAAACGTAAGAAAGACAAAAACAAATCAGAAAAACCTGAATCGGCGGAGCTTGATAGCGCGCTTGA
GCAAACGCTTGAGCCAATAAGCTCCCAGCCAGTAATTTCTGAGATTGAGCCACAGCCAGTGGATGTGATCACCGAGCCAG
AAAAGGCCATGATTAAACCGCCAGTGGTTGAAGAGATGGTCGTTGAGCCAACACCTGTAGAAATCCCTCCAGTTGTTGCT
CCAAACGAGCTGGATATCACACCAAGCAGTGCCGTTGCTGAAATCAACCCCGATGTTATGGTCGATGTGCCGGTGAAGGC
CGTAGCCGAAGAGAAAAAGGGTTTCTTTGGTCGTATTCGCAGTGGCTTAAGTAAAACTCGCTCAGGCTTTACCGATGGCC
TTGCCTCGCTATTGCTGGGTAAGAAAGAAATTGATGATGACCTGATGGATGATCTCGAAACTCAGCTCATCATGGCCGAT
GTTGGGGTGGAAGCCACGACCGAAATCATCAAGCGTCTTACCGCACGCGTGAGTCGCAAAGAATTGAAAGATTCGGATGC
TCTTTACGAAGCCTTAATCGACGAGCTGCAAGACATGTTGGCGGTATCACAGAAACCGTTGGTTATTGATAGCAGCAAAA
AGCCGTACGTTATTTTAATGGTGGGTATTAATGGTGTCGGTAAAACCACCACCATTGGTAAGCTGGCTAAACAATTTCAA
AAACGCGGTAAGAGCGTGATGCTCGCGGCGGGTGATACTTTCCGTGCCGCGGCGGTAGAGCAACTACAAGTATGGGGCGA
GCGCAATAATGTCCCTGTGGTTGCCCAGCACACAGGAGCGGATTCGGCTTCGGTATTGTTCGATGCCTTGCAAGCCGCAC
AGGCGCGTAAAGTCGATGTCTTGATTGCTGATACCGCAGGTCGGTTGCACAACAAAGACAACCTGATGCAAGAGTTAGAG
AAGGTTGTGCGTGTGATGCAGAAACTCGATCCGAGCGCACCTCATGAGGTGATGTTGGTGTTGGATGCAGGAACAGGTCA
AAACGCCATTAACCAAACTAAGCATTTCTTGCAGTCCGTTGGCGTAACCGGTTTAACGTTAACTAAGTTGGATGGCACTG
CCAAGGGTGGGATTATTTTTGCCTTGGCAAAACAGTTCGGCTTACCGGTGCGTTACATCGGTGTCGGTGAAGGAATTGAC
GATTTACGGCCATTTAATGCCGATGAATTTACCCGCGCCTTATTCCGTCACGATACAAAAGAAGATTAA
ATGTTTGATTTTTTTAAACGTAAGAAAGACAAAAACAAATCAGAAAAACCTGAATCGGCGGAGCTTGATAGCGCGCTTGA
GCAAACGCTTGAGCCAATAAGCTCCCAGCCAGTAATTTCTGAGATTGAGCCACAGCCAGTGGATGTGATCACCGAGCCAG
AAAAGGCCATGATTAAACCGCCAGTGGTTGAAGAGATGGTCGTTGAGCCAACACCTGTAGAAATCCCTCCAGTTGTTGCT
CCAAACGAGCTGGATATCACACCAAGCAGTGCCGTTGCTGAAATCAACCCCGATGTTATGGTCGATGTGCCGGTGAAGGC
CGTAGCCGAAGAGAAAAAGGGTTTCTTTGGTCGTATTCGCAGTGGCTTAAGTAAAACTCGCTCAGGCTTTACCGATGGCC
TTGCCTCGCTATTGCTGGGTAAGAAAGAAATTGATGATGACCTGATGGATGATCTCGAAACTCAGCTCATCATGGCCGAT
GTTGGGGTGGAAGCCACGACCGAAATCATCAAGCGTCTTACCGCACGCGTGAGTCGCAAAGAATTGAAAGATTCGGATGC
TCTTTACGAAGCCTTAATCGACGAGCTGCAAGACATGTTGGCGGTATCACAGAAACCGTTGGTTATTGATAGCAGCAAAA
AGCCGTACGTTATTTTAATGGTGGGTATTAATGGTGTCGGTAAAACCACCACCATTGGTAAGCTGGCTAAACAATTTCAA
AAACGCGGTAAGAGCGTGATGCTCGCGGCGGGTGATACTTTCCGTGCCGCGGCGGTAGAGCAACTACAAGTATGGGGCGA
GCGCAATAATGTCCCTGTGGTTGCCCAGCACACAGGAGCGGATTCGGCTTCGGTATTGTTCGATGCCTTGCAAGCCGCAC
AGGCGCGTAAAGTCGATGTCTTGATTGCTGATACCGCAGGTCGGTTGCACAACAAAGACAACCTGATGCAAGAGTTAGAG
AAGGTTGTGCGTGTGATGCAGAAACTCGATCCGAGCGCACCTCATGAGGTGATGTTGGTGTTGGATGCAGGAACAGGTCA
AAACGCCATTAACCAAACTAAGCATTTCTTGCAGTCCGTTGGCGTAACCGGTTTAACGTTAACTAAGTTGGATGGCACTG
CCAAGGGTGGGATTATTTTTGCCTTGGCAAAACAGTTCGGCTTACCGGTGCGTTACATCGGTGTCGGTGAAGGAATTGAC
GATTTACGGCCATTTAATGCCGATGAATTTACCCGCGCCTTATTCCGTCACGATACAAAAGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
48.122 |
100 |
0.486 |