Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   JP49775_RS06355 Genome accession   NZ_AP017922
Coordinates   1300898..1301521 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain JP02758     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1295898..1306521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JP49775_RS06330 (JP02758_1200) rpmG 1297474..1297623 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  JP49775_RS06335 (JP02758_1201) rpsN 1298077..1298346 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  JP49775_RS06340 (JP02758_1202) guaC 1298503..1299480 (+) 978 WP_000688126.1 GMP reductase -
  JP49775_RS06350 (JP02758_1203) - 1299502..1300518 (+) 1017 WP_173020057.1 CAP domain-containing protein -
  JP49775_RS06355 (JP02758_1204) dinR/lexA 1300898..1301521 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  JP49775_RS06360 (JP02758_1205) sosA 1301664..1301897 (+) 234 WP_000499646.1 DNA damage-induced cell division inhibitor SosA -
  JP49775_RS06365 (JP02758_1206) - 1302033..1302272 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  JP49775_RS06370 (JP02758_1207) recP/tkt 1302393..1304381 (+) 1989 WP_000481439.1 transketolase Machinery gene
  JP49775_RS06375 (JP02758_1208) - 1304659..1304901 (+) 243 WP_000246909.1 YneF family protein -
  JP49775_RS06380 - 1304888..1304986 (+) 99 WP_001789897.1 hypothetical protein -
  JP49775_RS06385 (JP02758_1209) - 1305080..1305547 (+) 468 WP_000966144.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=57589 JP49775_RS06355 WP_001208755.1 1300898..1301521(-) (dinR/lexA) [Staphylococcus aureus strain JP02758]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=57589 JP49775_RS06355 WP_001208755.1 1300898..1301521(-) (dinR/lexA) [Staphylococcus aureus strain JP02758]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTATCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment