Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE1441   Type   Regulator
Locus tag   KPG50_RS06845 Genome accession   NZ_CP076504
Coordinates   1322559..1323212 (+) Length   217 a.a.
NCBI ID   WP_011049930.1    Uniprot ID   A0A3X8NAQ4
Organism   Campylobacter jejuni strain R18.1301     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1304139..1349698 1322559..1323212 within 0


Gene organization within MGE regions


Location: 1304139..1349698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPG50_RS06700 (KPG50_06700) - 1304139..1305332 (-) 1194 WP_052778487.1 murein hydrolase activator EnvC -
  KPG50_RS06705 (KPG50_06705) - 1305329..1306135 (-) 807 WP_002860478.1 ABC transporter permease -
  KPG50_RS06710 (KPG50_06710) - 1306122..1306787 (-) 666 WP_002856386.1 cell division ATP-binding protein FtsE -
  KPG50_RS06715 (KPG50_06715) trmB 1306857..1308035 (-) 1179 WP_002869671.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KPG50_RS06720 (KPG50_06720) - 1308035..1309270 (-) 1236 WP_079263611.1 fibronectin type III domain-containing protein -
  KPG50_RS06725 (KPG50_06725) - 1309215..1310183 (-) 969 WP_002869673.1 RluA family pseudouridine synthase -
  KPG50_RS06730 (KPG50_06730) mrdB 1310261..1311361 (+) 1101 WP_002853654.1 FtsW/RodA/SpoVE family cell cycle protein -
  KPG50_RS06740 (KPG50_06740) - 1311700..1312875 (+) 1176 WP_002787311.1 site-specific integrase -
  KPG50_RS06745 (KPG50_06745) - 1312872..1313078 (-) 207 WP_002787309.1 AlpA family transcriptional regulator -
  KPG50_RS06750 (KPG50_06750) - 1313080..1313433 (-) 354 WP_002787307.1 hypothetical protein -
  KPG50_RS06755 (KPG50_06755) - 1313451..1314206 (-) 756 WP_203545215.1 site-specific DNA-methyltransferase -
  KPG50_RS06760 (KPG50_06760) - 1314184..1314450 (-) 267 WP_002787304.1 hypothetical protein -
  KPG50_RS06765 (KPG50_06765) - 1314434..1314805 (-) 372 WP_044261577.1 hypothetical protein -
  KPG50_RS06770 (KPG50_06770) - 1314806..1315030 (-) 225 WP_002787300.1 hypothetical protein -
  KPG50_RS06775 (KPG50_06775) - 1315039..1315800 (-) 762 WP_044600556.1 hypothetical protein -
  KPG50_RS06780 (KPG50_06780) - 1315737..1316051 (-) 315 WP_002787295.1 hypothetical protein -
  KPG50_RS06785 (KPG50_06785) - 1316130..1316450 (-) 321 WP_002787293.1 hypothetical protein -
  KPG50_RS06790 (KPG50_06790) - 1316815..1317039 (-) 225 WP_044261582.1 hypothetical protein -
  KPG50_RS06795 (KPG50_06795) - 1317574..1317807 (-) 234 WP_044261583.1 helix-turn-helix transcriptional regulator -
  KPG50_RS06800 (KPG50_06800) - 1317821..1318222 (-) 402 WP_044261584.1 hypothetical protein -
  KPG50_RS06805 (KPG50_06805) - 1318227..1318457 (-) 231 WP_002787283.1 hypothetical protein -
  KPG50_RS06810 (KPG50_06810) - 1318423..1318686 (-) 264 WP_044779014.1 hypothetical protein -
  KPG50_RS06815 (KPG50_06815) - 1318696..1319079 (-) 384 WP_044261586.1 hypothetical protein -
  KPG50_RS06820 (KPG50_06820) - 1319152..1319883 (-) 732 WP_216177257.1 phage regulatory protein/antirepressor Ant -
  KPG50_RS06825 (KPG50_06825) - 1320314..1320598 (-) 285 WP_052949217.1 hypothetical protein -
  KPG50_RS06830 (KPG50_06830) - 1320595..1320798 (-) 204 WP_052775426.1 hypothetical protein -
  KPG50_RS06835 (KPG50_06835) - 1321003..1321656 (+) 654 WP_002870336.1 hypothetical protein -
  KPG50_RS06840 (KPG50_06840) - 1321891..1322553 (+) 663 WP_002870274.1 S24/S26 family peptidase -
  KPG50_RS06845 (KPG50_06845) CJE1441 1322559..1323212 (+) 654 WP_011049930.1 DNA/RNA non-specific endonuclease Regulator
  KPG50_RS06850 (KPG50_06850) - 1323229..1323510 (+) 282 WP_002870263.1 PLDc N-terminal domain-containing protein -
  KPG50_RS06855 (KPG50_06855) - 1323524..1323721 (-) 198 WP_002913413.1 hypothetical protein -
  KPG50_RS06860 (KPG50_06860) - 1323639..1324058 (-) 420 WP_002870261.1 hypothetical protein -
  KPG50_RS06865 (KPG50_06865) - 1324287..1324745 (-) 459 WP_002858146.1 DUF5675 family protein -
  KPG50_RS06870 (KPG50_06870) - 1324794..1326077 (-) 1284 WP_216177441.1 hypothetical protein -
  KPG50_RS06875 (KPG50_06875) - 1326074..1326448 (-) 375 WP_216177260.1 DUF1353 domain-containing protein -
  KPG50_RS06880 (KPG50_06880) - 1326441..1326824 (-) 384 WP_002869963.1 hypothetical protein -
  KPG50_RS06885 (KPG50_06885) - 1326821..1327456 (-) 636 WP_216177263.1 DUF4376 domain-containing protein -
  KPG50_RS06890 (KPG50_06890) - 1327469..1327918 (-) 450 WP_216177265.1 hypothetical protein -
  KPG50_RS06895 (KPG50_06895) - 1327920..1329485 (-) 1566 WP_216177268.1 hypothetical protein -
  KPG50_RS06900 (KPG50_06900) - 1329478..1330110 (-) 633 WP_002788297.1 hypothetical protein -
  KPG50_RS06905 (KPG50_06905) - 1330107..1330424 (-) 318 WP_002788295.1 head-tail adaptor protein -
  KPG50_RS06910 (KPG50_06910) - 1330437..1330874 (-) 438 WP_002788293.1 phage gp6-like head-tail connector protein -
  KPG50_RS06915 (KPG50_06915) - 1330871..1331122 (-) 252 WP_002788291.1 hypothetical protein -
  KPG50_RS06920 (KPG50_06920) - 1331133..1332299 (-) 1167 WP_002788288.1 phage major capsid protein -
  KPG50_RS06925 (KPG50_06925) - 1332316..1332873 (-) 558 WP_002788287.1 HK97 family phage prohead protease -
  KPG50_RS06930 (KPG50_06930) - 1332959..1333828 (-) 870 WP_002788286.1 hypothetical protein -
  KPG50_RS06935 (KPG50_06935) - 1333841..1339567 (-) 5727 WP_216177285.1 hypothetical protein -
  KPG50_RS06940 (KPG50_06940) - 1339627..1339965 (+) 339 WP_038851012.1 hypothetical protein -
  KPG50_RS06945 (KPG50_06945) - 1339957..1340172 (-) 216 WP_002788282.1 hypothetical protein -
  KPG50_RS06950 (KPG50_06950) - 1340253..1340609 (-) 357 WP_002788281.1 hypothetical protein -
  KPG50_RS06955 (KPG50_06955) - 1340606..1341586 (-) 981 WP_038851013.1 hypothetical protein -
  KPG50_RS06960 (KPG50_06960) - 1341758..1342108 (-) 351 WP_044261881.1 hypothetical protein -
  KPG50_RS06965 (KPG50_06965) - 1342109..1342651 (-) 543 WP_002800770.1 HK97 gp10 family phage protein -
  KPG50_RS06970 (KPG50_06970) - 1342648..1343820 (-) 1173 WP_002788272.1 phage portal protein -
  KPG50_RS06975 (KPG50_06975) - 1343980..1344414 (-) 435 WP_002788265.1 type II toxin-antitoxin system PemK/MazF family toxin -
  KPG50_RS06980 (KPG50_06980) - 1344469..1346094 (-) 1626 WP_002788263.1 terminase large subunit -
  KPG50_RS06985 (KPG50_06985) - 1346098..1346733 (-) 636 WP_038850812.1 P27 family phage terminase small subunit -
  KPG50_RS06990 (KPG50_06990) - 1346994..1347335 (-) 342 WP_044261883.1 HNH endonuclease -
  KPG50_RS06995 (KPG50_06995) - 1347322..1347612 (-) 291 WP_002788257.1 hypothetical protein -
  KPG50_RS07005 (KPG50_07005) ktrB 1348355..1349698 (+) 1344 WP_002869974.1 TrkH family potassium uptake protein -

Sequence


Protein


Download         Length: 217 a.a.        Molecular weight: 25531.02 Da        Isoelectric Point: 9.8742

>NTDB_id=575855 KPG50_RS06845 WP_011049930.1 1322559..1323212(+) (CJE1441) [Campylobacter jejuni strain R18.1301]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=575855 KPG50_RS06845 WP_011049930.1 1322559..1323212(+) (CJE1441) [Campylobacter jejuni strain R18.1301]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3X8NAQ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

100

100

1

  CJE0566 Campylobacter jejuni RM1221

91.163

99.078

0.903