Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG06_RS00275 | Genome accession | NZ_CP094126 |
| Coordinates | 62817..63392 (+) | Length | 191 a.a. |
| NCBI ID | WP_245052385.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe056 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57817..68392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG06_RS00250 (MPG06_00250) | uvrD | 58506..60551 (+) | 2046 | WP_245057838.1 | DNA helicase UvrD | - |
| MPG06_RS00255 (MPG06_00255) | flgA | 60548..61204 (+) | 657 | WP_245057840.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG06_RS00260 (MPG06_00260) | - | 61214..61777 (+) | 564 | WP_245057842.1 | UbiX family flavin prenyltransferase | - |
| MPG06_RS00265 (MPG06_00265) | coaD | 61777..62250 (+) | 474 | WP_245057844.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG06_RS00270 (MPG06_00270) | tmk | 62254..62829 (+) | 576 | WP_245057846.1 | dTMP kinase | - |
| MPG06_RS00275 (MPG06_00275) | comFC | 62817..63392 (+) | 576 | WP_245052385.1 | ComF family protein | Machinery gene |
| MPG06_RS00280 (MPG06_00280) | - | 63425..65464 (+) | 2040 | WP_245057848.1 | N-6 DNA methylase | - |
| MPG06_RS00285 (MPG06_00285) | - | 65461..66360 (+) | 900 | Protein_55 | restriction endonuclease subunit S | - |
| MPG06_RS00290 (MPG06_00290) | - | 66448..67100 (+) | 653 | Protein_56 | IS607-like element IS607 family transposase | - |
| MPG06_RS00295 (MPG06_00295) | - | 67075..68334 (+) | 1260 | WP_245057114.1 | transposase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21293.90 Da Isoelectric Point: 9.0940
>NTDB_id=575548 MPG06_RS00275 WP_245052385.1 62817..63392(+) (comFC) [Helicobacter pylori strain Hpfe056]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=575548 MPG06_RS00275 WP_245052385.1 62817..63392(+) (comFC) [Helicobacter pylori strain Hpfe056]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCCTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCCTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |