Detailed information NTG0057554

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: I653_RS18120
• Genome accession: NC_020832
• Coordinates: 3647831..3648976 (+)
• Length: 381 a.a.
• NCBI ID: WP_015483839.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. BAB-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3642831..3653976

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I653_RS18095 (I653_18310)	albF	3642849..3644129 (+)	1281	WP_015483836.1	pitrilysin family protein	-
I653_RS18100 (I653_18315)	albG	3644126..3644827 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
I653_RS18105 (I653_18320)	ywhL	3644833..3646206 (-)	1374	WP_015483837.1	YncE family protein	-
I653_RS18110 (I653_18325)	ywhK	3646246..3647601 (-)	1356	WP_015384933.1	YncE family protein	-
I653_RS21645 (I653_18330)	-	3647598..3647828 (-)	231	WP_015483838.1	hypothetical protein	-
I653_RS18120 (I653_18335)	rapF	3647831..3648976 (+)	1146	WP_015483839.1	response regulator aspartate phosphatase RapF	Regulator
I653_RS18125 (I653_18340)	phrF	3648960..3649079 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
I653_RS18130 (I653_18345)	-	3649307..3649783 (+)	477	WP_015384936.1	hypothetical protein	-
I653_RS18135 (I653_18350)	-	3650160..3650729 (+)	570	WP_250498474.1	hypothetical protein	-
I653_RS18150 (I653_18365)	-	3652205..3652852 (+)	648	WP_015384940.1	ABC transporter ATP-binding protein	-
I653_RS18155 (I653_18370)	-	3652845..3653408 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45616.14 Da
• Isoelectric Point: 5.3765

>NTDB_id=57554 I653_RS18120 WP_015483839.1 3647831..3648976(+) (rapF) [Bacillus subtilis subsp. subtilis str. BAB-1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEKQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=57554 I653_RS18120 WP_015483839.1 3647831..3648976(+) (rapF) [Bacillus subtilis subsp. subtilis str. BAB-1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGAAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575