Detailed information NTG0575499

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: KOM03_RS17415
• Genome accession: NZ_CP076450
• Coordinates: 3566854..3569205 (-)
• Length: 783 a.a.
• NCBI ID: WP_060562640.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GMEKP1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3561854..3574205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KOM03_RS17380 (KOM03_17380)	-	3562219..3562554 (-)	336	WP_060562638.1	YqxA family protein	-
KOM03_RS17385 (KOM03_17385)	-	3562571..3563764 (-)	1194	WP_007612673.1	stage II sporulation protein P	-
KOM03_RS17390 (KOM03_17390)	gpr	3563832..3564938 (-)	1107	WP_007408268.1	GPR endopeptidase	-
KOM03_RS17395 (KOM03_17395)	rpsT	3565141..3565407 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
KOM03_RS17400 (KOM03_17400)	holA	3565424..3566469 (-)	1046	Protein_3401	DNA polymerase III subunit delta	-
KOM03_RS17405 (KOM03_17405)	-	3566509..3566660 (-)	152	Protein_3402	hypothetical protein	-
KOM03_RS17410 (KOM03_17410)	-	3566701..3566835 (+)	135	WP_003152870.1	YqzM family protein	-
KOM03_RS17415 (KOM03_17415)	comEC	3566854..3569205 (-)	2352	WP_060562640.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KOM03_RS17420 (KOM03_17420)	-	3569206..3569775 (-)	570	WP_003152868.1	ComE operon protein 2	-
KOM03_RS17425 (KOM03_17425)	comEA	3569842..3570456 (-)	615	WP_060562641.1	helix-hairpin-helix domain-containing protein	Machinery gene
KOM03_RS17430 (KOM03_17430)	comER	3570515..3571336 (+)	822	WP_216119320.1	late competence protein ComER	-
KOM03_RS17435 (KOM03_17435)	-	3571405..3572142 (-)	738	WP_015240247.1	class I SAM-dependent methyltransferase	-
KOM03_RS17440 (KOM03_17440)	rsfS	3572139..3572495 (-)	357	WP_007408260.1	ribosome silencing factor	-
KOM03_RS17445 (KOM03_17445)	yqeK	3572513..3573073 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
KOM03_RS17450 (KOM03_17450)	-	3573063..3573632 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
KOM03_RS17455 (KOM03_17455)	yhbY	3573643..3573933 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86739.61 Da
• Isoelectric Point: 8.9068

>NTDB_id=575499 KOM03_RS17415 WP_060562640.1 3566854..3569205(-) (comEC) [Bacillus velezensis strain GMEKP1]
MKYKYLLLPLAAVSATAGIAAAHVFWVMLLFLLYLLFIIVKTKRHALVIVCLVSFCLYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATVPGGFDYKEYLYSQQI
HWLFSVTSIEQCEKSKQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGILLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGESRLAGLAMASLIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFGMFDLVMKPVHDFITYAASVDLFTMIVSKPDFLSLLLLAVSVFTLFAAWEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGKSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPNLRADILKAGHHGSKSSTSEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDISGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=575499 KOM03_RS17415 WP_060562640.1 3566854..3569205(-) (comEC) [Bacillus velezensis strain GMEKP1]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTTCTGGGT
TATGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATTGTAAAAACAAAGCGCCATGCTCTGGTTATCGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGCTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTACAAAATCCGGTCTCTTGAGGAAAAGAGACTCATTGAACAGCTTGAACCGGGGATGCGCTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGGTTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACTTCCATTGAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAAGCAGGAATTTTGCTGCTGCT
GTTTTTGCCGGTGTATACACTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCCCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGGAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTGATTGCAGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCACTTGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGTTTCCTTCTTCTTTTACTCTCAAGGCAGATGGGAGAATGTTTGTTTGGTATGTTTGACCTTGTGATGAA
ACCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTCTTTCCC
TTCTGCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTGGGAAAAGGGAGGTTTTTTAAAACTCAGGAAGTCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGCGCGCCGCACCGCAAAGGGACCGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGTCACCCGTATTCTATCGGTGAGAAGGTTTTGATTCCATTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCACTGATTTTAACCCATGCGGATCAAGATCACATCGGAGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAGGATCAGAACATATTAAATATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGTCTGACGGAAAGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAAGTGCTGAAAACGTATCCGAATCTGAGAGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCAACGAGTGAAGCCTTTTTGAAGCAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATAT
CAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-470)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Domain of unknown function (DUF4131) (DUF4131) (25-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	57.124	98.595	0.563