Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KOM03_RS10875 Genome accession   NZ_CP076450
Coordinates   2135549..2135740 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain GMEKP1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2130549..2140740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KOM03_RS10845 (KOM03_10845) argF 2131401..2132372 (+) 972 WP_012117275.1 ornithine carbamoyltransferase -
  KOM03_RS10850 (KOM03_10850) - 2132448..2132627 (+) 180 WP_003155070.1 YjzC family protein -
  KOM03_RS10855 (KOM03_10855) - 2132664..2132849 (-) 186 WP_007409129.1 YjzD family protein -
  KOM03_RS10860 (KOM03_10860) - 2133110..2133844 (+) 735 WP_060562151.1 hypothetical protein -
  KOM03_RS10865 (KOM03_10865) - 2133927..2134493 (+) 567 WP_017417444.1 hypothetical protein -
  KOM03_RS10870 (KOM03_10870) med 2134583..2135536 (+) 954 WP_060562152.1 BMP family ABC transporter substrate-binding protein Regulator
  KOM03_RS10875 (KOM03_10875) comZ 2135549..2135740 (+) 192 WP_003155061.1 ComZ family protein Regulator
  KOM03_RS10880 (KOM03_10880) - 2135769..2135987 (-) 219 WP_007409123.1 hypothetical protein -
  KOM03_RS10885 (KOM03_10885) - 2136154..2137092 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  KOM03_RS10890 (KOM03_10890) fabF 2137115..2138353 (+) 1239 WP_060562153.1 beta-ketoacyl-ACP synthase II -
  KOM03_RS10895 (KOM03_10895) - 2138437..2139222 (+) 786 WP_060562154.1 DUF2268 domain-containing protein -
  KOM03_RS10900 (KOM03_10900) - 2139396..2140382 (+) 987 WP_033574515.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=575473 KOM03_RS10875 WP_003155061.1 2135549..2135740(+) (comZ) [Bacillus velezensis strain GMEKP1]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=575473 KOM03_RS10875 WP_003155061.1 2135549..2135740(+) (comZ) [Bacillus velezensis strain GMEKP1]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACTTCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794