Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   KOM03_RS10870 Genome accession   NZ_CP076450
Coordinates   2134583..2135536 (+) Length   317 a.a.
NCBI ID   WP_060562152.1    Uniprot ID   -
Organism   Bacillus velezensis strain GMEKP1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2129583..2140536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KOM03_RS10845 (KOM03_10845) argF 2131401..2132372 (+) 972 WP_012117275.1 ornithine carbamoyltransferase -
  KOM03_RS10850 (KOM03_10850) - 2132448..2132627 (+) 180 WP_003155070.1 YjzC family protein -
  KOM03_RS10855 (KOM03_10855) - 2132664..2132849 (-) 186 WP_007409129.1 YjzD family protein -
  KOM03_RS10860 (KOM03_10860) - 2133110..2133844 (+) 735 WP_060562151.1 hypothetical protein -
  KOM03_RS10865 (KOM03_10865) - 2133927..2134493 (+) 567 WP_017417444.1 hypothetical protein -
  KOM03_RS10870 (KOM03_10870) med 2134583..2135536 (+) 954 WP_060562152.1 BMP family ABC transporter substrate-binding protein Regulator
  KOM03_RS10875 (KOM03_10875) comZ 2135549..2135740 (+) 192 WP_003155061.1 ComZ family protein Regulator
  KOM03_RS10880 (KOM03_10880) - 2135769..2135987 (-) 219 WP_007409123.1 hypothetical protein -
  KOM03_RS10885 (KOM03_10885) - 2136154..2137092 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  KOM03_RS10890 (KOM03_10890) fabF 2137115..2138353 (+) 1239 WP_060562153.1 beta-ketoacyl-ACP synthase II -
  KOM03_RS10895 (KOM03_10895) - 2138437..2139222 (+) 786 WP_060562154.1 DUF2268 domain-containing protein -
  KOM03_RS10900 (KOM03_10900) - 2139396..2140382 (+) 987 WP_033574515.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35328.92 Da        Isoelectric Point: 4.6067

>NTDB_id=575472 KOM03_RS10870 WP_060562152.1 2134583..2135536(+) (med) [Bacillus velezensis strain GMEKP1]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=575472 KOM03_RS10870 WP_060562152.1 2134583..2135536(+) (med) [Bacillus velezensis strain GMEKP1]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAACCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTGAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.864

100

0.789