Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   ZHX2020_RS07790 Genome accession   NZ_CP076409
Coordinates   1429800..1430522 (-) Length   240 a.a.
NCBI ID   WP_014481051.1    Uniprot ID   -
Organism   Bacillus sp. ZHX3     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1424800..1435522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZHX2020_RS07755 (ZHX2020_07720) fliW 1424940..1425371 (-) 432 WP_003228007.1 flagellar assembly protein FliW -
  ZHX2020_RS07760 (ZHX2020_07725) - 1425392..1425967 (-) 576 WP_014481045.1 DUF6470 family protein -
  ZHX2020_RS07765 (ZHX2020_07730) flgL 1426014..1426910 (-) 897 WP_014481046.1 flagellar hook-associated protein FlgL -
  ZHX2020_RS07770 (ZHX2020_07735) flgK 1426921..1428444 (-) 1524 WP_014481047.1 flagellar hook-associated protein FlgK -
  ZHX2020_RS07775 (ZHX2020_07740) flgN 1428463..1428945 (-) 483 WP_014481048.1 flagellar protein FlgN -
  ZHX2020_RS07780 (ZHX2020_07745) flgM 1428961..1429227 (-) 267 WP_014481049.1 flagellar biosynthesis anti-sigma factor FlgM -
  ZHX2020_RS07785 (ZHX2020_07750) - 1429308..1429727 (-) 420 WP_014481050.1 TIGR03826 family flagellar region protein -
  ZHX2020_RS07790 (ZHX2020_07755) comFC 1429800..1430522 (-) 723 WP_014481051.1 comF operon protein ComFC Machinery gene
  ZHX2020_RS07795 (ZHX2020_07760) comFB 1430486..1430782 (-) 297 WP_003227989.1 late competence protein ComFB -
  ZHX2020_RS07800 (ZHX2020_07765) comFA 1430842..1432233 (-) 1392 WP_014481052.1 ATP-dependent helicase ComFA Machinery gene
  ZHX2020_RS07805 (ZHX2020_07770) - 1432340..1433185 (-) 846 WP_014481053.1 DegV family protein -
  ZHX2020_RS07810 (ZHX2020_07775) degU 1433283..1433972 (-) 690 WP_014481054.1 two-component system response regulator DegU Regulator
  ZHX2020_RS07815 (ZHX2020_07780) degS 1434055..1435212 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27521.79 Da        Isoelectric Point: 9.3154

>NTDB_id=575127 ZHX2020_RS07790 WP_014481051.1 1429800..1430522(-) (comFC) [Bacillus sp. ZHX3]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAQLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSERIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Nucleotide


Download         Length: 723 bp        

>NTDB_id=575127 ZHX2020_RS07790 WP_014481051.1 1429800..1430522(-) (comFC) [Bacillus sp. ZHX3]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTACTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACAGCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGCGCATTTTTGATACAAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

Double zinc ribbon domain (DZR_2)

(14-71)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Bacillus subtilis subsp. subtilis str. 168

99.167

100

0.992