Detailed information NTG0575086

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JNUCC22_RS16550
• Genome accession: NZ_CP076408
• Coordinates: 3379475..3380638 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus sp. JNUCC-22
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3374475..3385638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNUCC22_RS16520 (JNUCC22_16520)	-	3374739..3375158 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
JNUCC22_RS16525 (JNUCC22_16525)	comFC	3375232..3375921 (-)	690	WP_199022660.1	phosphoribosyltransferase family protein	Machinery gene
JNUCC22_RS16530 (JNUCC22_16530)	-	3375927..3376211 (-)	285	WP_007407481.1	competence protein ComFB	-
JNUCC22_RS16535 (JNUCC22_16535)	comFA	3376269..3377654 (-)	1386	WP_043020592.1	DEAD/DEAH box helicase	Machinery gene
JNUCC22_RS16540 (JNUCC22_16540)	-	3377763..3378611 (-)	849	WP_003151387.1	DegV family protein	-
JNUCC22_RS16545 (JNUCC22_16545)	degU	3378709..3379398 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JNUCC22_RS16550 (JNUCC22_16550)	degS	3379475..3380638 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
JNUCC22_RS16555 (JNUCC22_16555)	-	3380861..3381508 (+)	648	WP_007407485.1	YigZ family protein	-
JNUCC22_RS16560 (JNUCC22_16560)	-	3381513..3382733 (+)	1221	WP_061581227.1	LCP family protein	-
JNUCC22_RS16565 (JNUCC22_16565)	-	3382832..3383908 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
JNUCC22_RS16570 (JNUCC22_16570)	-	3384041..3385237 (-)	1197	WP_072589628.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=575086 JNUCC22_RS16550 WP_007407484.1 3379475..3380638(-) (degS) [Bacillus sp. JNUCC-22]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=575086 JNUCC22_RS16550 WP_007407484.1 3379475..3380638(-) (degS) [Bacillus sp. JNUCC-22]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGTCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951