Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   JNUCC22_RS14570 Genome accession   NZ_CP076408
Coordinates   2991592..2991732 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus sp. JNUCC-22     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2986592..2996732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS14545 (JNUCC22_14545) - 2986938..2987321 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  JNUCC22_RS14550 (JNUCC22_14550) comA 2987343..2987987 (-) 645 WP_216061841.1 response regulator transcription factor Regulator
  JNUCC22_RS14555 (JNUCC22_14555) comP 2988068..2990368 (-) 2301 WP_032867184.1 histidine kinase Regulator
  JNUCC22_RS14560 (JNUCC22_14560) comX 2990382..2990555 (-) 174 WP_012118314.1 competence pheromone ComX -
  JNUCC22_RS14565 (JNUCC22_14565) - 2990524..2991384 (-) 861 WP_157774448.1 polyprenyl synthetase family protein -
  JNUCC22_RS14570 (JNUCC22_14570) degQ 2991592..2991732 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JNUCC22_RS14575 (JNUCC22_14575) - 2992198..2992539 (+) 342 WP_216061842.1 hypothetical protein -
  JNUCC22_RS14580 (JNUCC22_14580) - 2992546..2993769 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  JNUCC22_RS14585 (JNUCC22_14585) - 2993899..2995365 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  JNUCC22_RS14590 (JNUCC22_14590) - 2995383..2995934 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  JNUCC22_RS14595 (JNUCC22_14595) - 2996031..2996429 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=575080 JNUCC22_RS14570 WP_003152043.1 2991592..2991732(-) (degQ) [Bacillus sp. JNUCC-22]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=575080 JNUCC22_RS14570 WP_003152043.1 2991592..2991732(-) (degQ) [Bacillus sp. JNUCC-22]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCTATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891