Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   I653_RS02080 Genome accession   NC_020832
Coordinates   423453..424403 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418453..429403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS02055 (I653_01905) rapC 419913..421061 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  I653_RS02060 (I653_01910) phrC 421045..421167 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  I653_RS20055 (I653_01915) yczM 421267..421356 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  I653_RS20060 (I653_01920) yczN 421438..421551 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  I653_RS02075 (I653_01925) thrD 421704..423068 (-) 1365 WP_015382767.1 aspartate kinase -
  I653_RS02080 (I653_01930) ceuB 423453..424403 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  I653_RS02085 (I653_01935) yclO 424396..425343 (+) 948 WP_015482795.1 petrobactin ABC transporter permease YclO -
  I653_RS02090 (I653_01940) yclP 425337..426095 (+) 759 WP_015482796.1 petrobactin ABC transporter ATP-binding protein YclP -
  I653_RS02095 (I653_01945) yclQ 426117..427070 (+) 954 WP_015482797.1 petrobactin ABC transporter substrate-binding protein YclQ -
  I653_RS02100 (I653_01950) cdaE 427117..428535 (-) 1419 WP_015382772.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=57492 I653_RS02080 WP_015382768.1 423453..424403(+) (ceuB) [Bacillus subtilis subsp. subtilis str. BAB-1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=57492 I653_RS02080 WP_015382768.1 423453..424403(+) (ceuB) [Bacillus subtilis subsp. subtilis str. BAB-1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTTTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAACAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCC
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GATTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTAGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment