Detailed information NTG0574821

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KN217_RS14165
• Genome accession: NZ_CP076348
• Coordinates: 2914319..2916541 (-)
• Length: 740 a.a.
• NCBI ID: WP_301618629.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain DN36
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2909319..2921541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KN217_RS14130 (KN217_14070)	murB	2909710..2910729 (-)	1020	WP_301618621.1	UDP-N-acetylmuramate dehydrogenase	-
KN217_RS14135 (KN217_14075)	-	2910726..2911190 (-)	465	WP_155550323.1	low molecular weight protein-tyrosine-phosphatase	-
KN217_RS14140 (KN217_14080)	kdsB	2911193..2911957 (-)	765	WP_155550322.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KN217_RS14145 (KN217_14085)	-	2911954..2912139 (-)	186	WP_008570668.1	Trm112 family protein	-
KN217_RS14150 (KN217_14090)	lpxK	2912186..2913190 (-)	1005	WP_213663825.1	tetraacyldisaccharide 4'-kinase	-
KN217_RS14155 (KN217_14095)	-	2913190..2913618 (-)	429	WP_301618626.1	biopolymer transporter ExbD	-
KN217_RS14160 (KN217_14100)	-	2913615..2914247 (-)	633	WP_102828861.1	MotA/TolQ/ExbB proton channel family protein	-
KN217_RS14165 (KN217_14105)	comA	2914319..2916541 (-)	2223	WP_301618629.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KN217_RS14170 (KN217_14110)	-	2916691..2917206 (+)	516	WP_008570674.1	DUF2062 domain-containing protein	-
KN217_RS14175 (KN217_14115)	-	2917216..2918460 (-)	1245	WP_008570676.1	lipoprotein-releasing ABC transporter permease subunit	-
KN217_RS14180 (KN217_14120)	lolD	2918460..2919158 (-)	699	WP_008570677.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
KN217_RS14185 (KN217_14125)	-	2919166..2920413 (-)	1248	WP_301618632.1	lipoprotein-releasing ABC transporter permease subunit	-
KN217_RS14190 (KN217_14130)	-	2920512..2921084 (+)	573	WP_008570679.1	PilZ domain-containing protein	-
KN217_RS14195 (KN217_14135)	-	2921089..2921391 (+)	303	WP_301620658.1	phosphodiesterase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 80606.79 Da
• Isoelectric Point: 10.2482

>NTDB_id=574821 KN217_RS14165 WP_301618629.1 2914319..2916541(-) (comA) [Stutzerimonas stutzeri strain DN36]
MRAGMLALAMGLLLPRFLPGLPAAWVLIVLGLLGLLCLLRQASRPLSWLCFGLLWACLQMQAAMDERLASELDGRTFWLE
GQVLGLPAVQDGVVRFELGAISSRHAGLPPRVRLAWYGGPQLRAGERWRLAARLKRPHGLVNPHSFDHEAWLLARHIGAT
GTVKIGERLQEAIGAGGWRDRLRARLLAVEAQGRQGAIAALVVGDSSGLSPTDWRVLQDTGTVHLMVISGQHVGLLAGLL
YGLVALLARIGWWPRHLPWLPCACTAAFAGALGYGWLAGFEVPVQRACVMVAVVLLWRLRFRQLGVWLPLLIALDGVLLF
DPLASLQPGFWLSFGAVALLALVFSGRLGAWRWWLTLPRAQWAMVVGLLPLMLALGLPISASGPLANLLAVPWVGLTVPV
ALLGTVLLPLPGIGEGLLLLAGWSLAWLFQLLELLADWQAAWIVESLPLWAWSLATVGALVLLLPAGVPFRALGALLLLP
LLYPSTPLPLAGKADVWVFDVGQGLSVLVRTRTHALLYDAGPRHGDFDTGERIVFPSLRRLGVKRLDLLLISHADSDHAG
GAVAMQRLLPPPRVFSGEPARLPAMLQAQSCENQSWQWDGVHFALWRWAQAADGNQSSCVLMIEAEGERLLLTGDIDARA
EQALVQSDWLLAAHWLLLPHHGSNSSSSPAFLAAVRPQNALISRSRHNAFGHPHPAVVGRLRDVGVRLYDTAESGALKVE
LGAFRNARGLREQRRFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=574821 KN217_RS14165 WP_301618629.1 2914319..2916541(-) (comA) [Stutzerimonas stutzeri strain DN36]
ATGCGGGCAGGGATGCTGGCATTGGCCATGGGTTTGTTGTTGCCGCGCTTTCTGCCGGGGTTGCCTGCGGCCTGGGTATT
GATTGTGCTGGGCTTGCTGGGGCTGCTGTGCCTGTTGCGGCAAGCGTCCCGGCCGTTGTCCTGGCTGTGTTTCGGCCTGC
TCTGGGCGTGTCTGCAGATGCAGGCGGCGATGGACGAACGGCTCGCCAGCGAACTCGATGGCCGCACGTTCTGGCTCGAA
GGCCAGGTGCTCGGTTTGCCGGCCGTGCAGGACGGTGTGGTGCGCTTCGAACTCGGCGCTATCAGCTCGCGGCACGCCGG
CTTGCCGCCGCGCGTGCGCCTGGCCTGGTATGGCGGTCCGCAGCTGCGCGCCGGTGAGCGTTGGCGGCTGGCAGCGCGGC
TGAAACGCCCGCACGGACTGGTTAACCCGCATTCGTTCGATCATGAGGCCTGGCTGCTGGCGCGCCACATCGGCGCTACC
GGAACGGTCAAGATCGGCGAGCGCCTGCAGGAGGCAATTGGTGCCGGTGGCTGGCGTGATCGCTTGCGTGCCCGGCTACT
GGCCGTCGAGGCGCAGGGACGGCAGGGTGCTATCGCGGCGCTGGTGGTCGGCGATAGCTCGGGCCTGTCACCAACGGATT
GGCGCGTCCTGCAGGACACCGGCACGGTGCATCTGATGGTCATCTCCGGCCAGCATGTCGGCTTGCTGGCCGGCCTGCTG
TACGGGCTGGTGGCGCTGCTGGCGCGCATCGGTTGGTGGCCGCGACACCTGCCGTGGCTGCCTTGTGCCTGTACGGCGGC
ATTCGCCGGTGCACTCGGTTACGGCTGGCTGGCCGGGTTCGAGGTGCCGGTCCAGCGGGCCTGCGTGATGGTGGCGGTGG
TGCTGCTCTGGCGCCTGCGCTTTCGTCAGTTGGGCGTCTGGCTACCGCTGCTGATCGCCCTCGACGGTGTCCTGCTGTTC
GATCCGTTGGCTAGTCTGCAGCCGGGGTTCTGGCTGTCGTTCGGTGCCGTCGCCTTGCTTGCCCTGGTGTTCTCCGGGCG
ACTGGGTGCCTGGCGCTGGTGGCTGACACTGCCGCGTGCGCAGTGGGCGATGGTGGTGGGGTTGCTGCCCTTGATGCTGG
CGCTGGGGTTGCCGATCAGCGCCAGCGGGCCATTGGCGAATCTGCTGGCAGTGCCCTGGGTTGGCCTGACGGTGCCCGTG
GCGCTGCTCGGCACGGTGTTGCTGCCGTTGCCGGGCATCGGTGAAGGTTTGCTGCTGCTGGCGGGCTGGTCGCTGGCATG
GCTGTTCCAGTTGCTGGAGTTGCTCGCCGACTGGCAGGCAGCCTGGATAGTGGAAAGTCTGCCGCTCTGGGCCTGGTCGC
TGGCGACTGTGGGAGCGCTGGTATTGCTGCTGCCCGCCGGCGTGCCGTTCCGTGCGCTGGGCGCGCTGCTCCTGCTGCCA
CTGCTGTATCCGTCGACGCCGCTGCCGCTTGCCGGCAAAGCCGACGTCTGGGTGTTCGACGTGGGGCAAGGCCTCTCGGT
GCTGGTGCGCACCCGCACCCATGCGTTGCTTTACGATGCCGGTCCGCGCCATGGCGATTTCGACACGGGCGAGCGAATCG
TCTTCCCGTCGCTGCGGCGGCTGGGAGTGAAGCGGCTGGACCTGCTGCTGATCAGTCATGCCGACAGCGATCATGCCGGC
GGCGCGGTGGCCATGCAGCGCCTGCTGCCGCCGCCGCGAGTGTTCAGCGGCGAGCCGGCGCGGCTGCCTGCGATGTTGCA
GGCGCAATCCTGCGAGAACCAGAGCTGGCAGTGGGACGGCGTGCACTTCGCCCTCTGGCGCTGGGCGCAGGCGGCAGACG
GCAATCAGTCTTCCTGTGTGCTGATGATCGAGGCCGAAGGCGAACGCCTGCTACTGACCGGCGATATCGATGCGCGGGCG
GAACAGGCACTGGTGCAGAGCGACTGGCTGCTGGCGGCGCACTGGCTGCTGTTACCGCATCACGGCAGCAACAGTTCCTC
TTCGCCGGCCTTTCTCGCGGCGGTACGGCCGCAGAACGCGCTGATCTCGCGCAGCCGTCACAACGCGTTTGGCCATCCGC
ACCCCGCGGTCGTCGGGCGTCTGCGGGACGTGGGCGTGCGGCTGTACGACACCGCCGAGTCAGGCGCGCTGAAGGTTGAA
CTGGGGGCGTTTCGCAACGCGCGCGGTTTGCGCGAGCAGCGGCGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-682)

• Competence protein (Competence) (201-465)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	70.391	96.757	0.681
comA	Ralstonia pseudosolanacearum GMI1000	38.144	100	0.4