Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MQG44_RS09135 Genome accession   NZ_CP093912
Coordinates   1858515..1859150 (+) Length   211 a.a.
NCBI ID   WP_005594855.1    Uniprot ID   A0A5D0EK75
Organism   Aggregatibacter actinomycetemcomitans strain 14R     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1853515..1864150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQG44_RS09115 xylA 1854203..1855522 (+) 1320 WP_005541843.1 xylose isomerase -
  MQG44_RS09120 xylB 1855572..1857044 (+) 1473 Protein_1782 xylulokinase -
  MQG44_RS09130 - 1857639..1857884 (+) 246 Protein_1783 type IV secretion protein Rhs -
  MQG44_RS09135 sxy/tfoX 1858515..1859150 (+) 636 WP_005594855.1 TfoX/Sxy family DNA transformation protein Regulator
  MQG44_RS09140 rpoH 1859217..1860065 (-) 849 WP_005548833.1 RNA polymerase sigma factor RpoH -
  MQG44_RS09145 - 1860250..1860564 (-) 315 Protein_1786 DUF2322 family protein -
  MQG44_RS09150 murB 1860580..1861605 (-) 1026 WP_005541968.1 UDP-N-acetylmuramate dehydrogenase -
  MQG44_RS09155 narQ 1861620..1863323 (-) 1704 WP_032998607.1 nitrate/nitrite two-component system sensor histidine kinase NarQ -
  MQG44_RS09160 - 1863599..1863883 (+) 285 WP_005548831.1 chaperone NapD -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23994.17 Da        Isoelectric Point: 10.4976

>NTDB_id=572623 MQG44_RS09135 WP_005594855.1 1858515..1859150(+) (sxy/tfoX) [Aggregatibacter actinomycetemcomitans strain 14R]
MTTVSQRLKNEFKQLVDGEISIKNLFTGHGIFHSGIMFALHQNDSIFLRAEDELVPYLESLGAVAYSIDPNNTNKLALHR
YYQLPHSIRKNKPLFEKTVKLSIQQAKFKKIAEDLTKKERIKELANFSIKHERLLAKINIYTVSEFQKIGAIHSYVRLKK
LGVSANVELLWTLCAALKNKHASLLTEKEKSAILTKLNVLLAANGLRKVKV

Nucleotide


Download         Length: 636 bp        

>NTDB_id=572623 MQG44_RS09135 WP_005594855.1 1858515..1859150(+) (sxy/tfoX) [Aggregatibacter actinomycetemcomitans strain 14R]
ATGACAACGGTATCTCAAAGACTCAAGAACGAATTCAAACAACTAGTAGATGGTGAAATCAGTATTAAAAATTTATTCAC
CGGACATGGTATATTTCATTCAGGAATAATGTTTGCACTTCATCAAAACGATAGCATTTTCTTGCGGGCTGAAGATGAGT
TAGTCCCTTACTTAGAAAGTTTAGGTGCTGTAGCTTATTCAATTGATCCCAATAATACGAATAAACTGGCACTCCACCGT
TACTATCAACTTCCTCATTCTATTCGTAAAAATAAGCCGTTATTTGAAAAAACCGTTAAATTGTCTATTCAACAGGCAAA
ATTTAAGAAAATCGCTGAAGATTTGACAAAAAAAGAGCGAATTAAAGAATTGGCTAATTTTTCCATTAAGCATGAAAGAT
TGCTGGCTAAAATTAATATTTATACGGTAAGTGAATTTCAGAAGATCGGCGCAATTCACAGCTATGTTAGGTTAAAGAAA
CTGGGTGTTTCTGCCAACGTAGAATTGTTATGGACTTTATGCGCCGCATTAAAAAATAAGCATGCTTCGTTGCTTACGGA
AAAGGAAAAATCGGCAATTTTGACTAAATTAAATGTTTTACTTGCAGCAAATGGTTTGCGGAAAGTAAAGGTTTAA

Domains

Predicted by InterProScan.

TfoX N-terminal domain (TfoX_N)

(15-106)

TfoX C-terminal domain (TfoX_C)

(118-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5D0EK75

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Haemophilus influenzae Rd KW20

40.513

92.417

0.374
  sxy/tfoX Actinobacillus pleuropneumoniae strain HS143

36.538

98.578

0.36