Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MN179_RS02090 Genome accession   NZ_CP093357
Coordinates   448377..448784 (+) Length   135 a.a.
NCBI ID   WP_034023456.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain E131     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 443377..453784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MN179_RS02060 (MN179_02060) - 443425..444429 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  MN179_RS02065 (MN179_02065) pyrR 444453..444965 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MN179_RS02070 (MN179_02070) ruvX 445077..445511 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  MN179_RS02075 (MN179_02075) - 445511..446080 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  MN179_RS02080 (MN179_02080) - 446129..447022 (-) 894 WP_003084580.1 TonB family protein -
  MN179_RS02085 (MN179_02085) gshB 447169..448122 (-) 954 WP_003100943.1 glutathione synthase -
  MN179_RS02090 (MN179_02090) pilG 448377..448784 (+) 408 WP_034023456.1 twitching motility response regulator PilG Regulator
  MN179_RS02095 (MN179_02095) pilH 448831..449196 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  MN179_RS02100 (MN179_02100) - 449247..449783 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  MN179_RS02105 (MN179_02105) pilJ 449868..451916 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  MN179_RS02110 (MN179_02110) pilK 451977..452852 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14748.14 Da        Isoelectric Point: 7.1340

>NTDB_id=571679 MN179_RS02090 WP_034023456.1 448377..448784(+) (pilG) [Pseudomonas aeruginosa strain E131]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=571679 MN179_RS02090 WP_034023456.1 448377..448784(+) (pilG) [Pseudomonas aeruginosa strain E131]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGACACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

43.59

86.667

0.378