Detailed information
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | KHS93_RS01740 | Genome accession | NZ_CP075547 |
| Coordinates | 321158..321556 (-) | Length | 132 a.a. |
| NCBI ID | WP_043866822.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain SN16-1 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 316158..326556
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHS93_RS19680 | - | 317157..317318 (-) | 162 | Protein_297 | hypothetical protein | - |
| KHS93_RS01710 (KHS93_01710) | - | 317435..318637 (+) | 1203 | WP_069473143.1 | GTP-binding protein | - |
| KHS93_RS01715 (KHS93_01715) | - | 318702..319838 (+) | 1137 | WP_003156594.1 | zinc-dependent alcohol dehydrogenase | - |
| KHS93_RS01720 (KHS93_01720) | - | 319853..320287 (+) | 435 | WP_003156592.1 | RDD family protein | - |
| KHS93_RS01725 (KHS93_01725) | - | 320359..320679 (+) | 321 | WP_014304315.1 | YckD family protein | - |
| KHS93_RS01730 (KHS93_01730) | - | 320783..320899 (+) | 117 | WP_015388718.1 | family 1 glycosylhydrolase | - |
| KHS93_RS01735 (KHS93_01735) | - | 320898..321117 (+) | 220 | Protein_303 | family 1 glycosylhydrolase | - |
| KHS93_RS01740 (KHS93_01740) | nin/comJ | 321158..321556 (-) | 399 | WP_043866822.1 | competence protein ComJ | Regulator |
| KHS93_RS01745 (KHS93_01745) | nucA/comI | 321578..322015 (-) | 438 | WP_003156588.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| KHS93_RS01750 (KHS93_01750) | hxlB | 322374..322931 (-) | 558 | WP_014304318.1 | 6-phospho-3-hexuloisomerase | - |
| KHS93_RS01755 (KHS93_01755) | hxlA | 322928..323563 (-) | 636 | WP_014304319.1 | 3-hexulose-6-phosphate synthase | - |
| KHS93_RS01760 (KHS93_01760) | - | 323795..324157 (+) | 363 | WP_014304320.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15014.99 Da Isoelectric Point: 4.6564
>NTDB_id=569426 KHS93_RS01740 WP_043866822.1 321158..321556(-) (nin/comJ) [Bacillus amyloliquefaciens strain SN16-1]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM
Nucleotide
Download Length: 399 bp
>NTDB_id=569426 KHS93_RS01740 WP_043866822.1 321158..321556(-) (nin/comJ) [Bacillus amyloliquefaciens strain SN16-1]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGAAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGAAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
76.744 |
97.727 |
0.75 |