Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   KIL00_RS17140 Genome accession   NZ_CP075344
Coordinates   3253042..3255351 (-) Length   769 a.a.
NCBI ID   WP_213783444.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3248042..3260351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS17100 (KIL00_17100) mrpB 3248509..3248940 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  KIL00_RS17105 (KIL00_17105) mrpC 3248940..3249281 (+) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  KIL00_RS17110 (KIL00_17110) mrpD 3249274..3250755 (+) 1482 WP_033881486.1 Na+/H+ antiporter subunit D -
  KIL00_RS17115 (KIL00_17115) mrpE 3250761..3251237 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  KIL00_RS17120 (KIL00_17120) mrpF 3251237..3251521 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  KIL00_RS17125 (KIL00_17125) mnhG 3251505..3251879 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  KIL00_RS17130 (KIL00_17130) yuxO 3251918..3252298 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  KIL00_RS17135 (KIL00_17135) comA 3252317..3252961 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  KIL00_RS17140 (KIL00_17140) comP 3253042..3255351 (-) 2310 WP_213783444.1 histidine kinase Regulator
  KIL00_RS17145 (KIL00_17145) comX 3255366..3255533 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  KIL00_RS17150 (KIL00_17150) comQ 3255521..3256420 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  KIL00_RS17155 (KIL00_17155) degQ 3256605..3256745 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  KIL00_RS17160 (KIL00_17160) - 3256967..3257092 (+) 126 WP_003228793.1 hypothetical protein -
  KIL00_RS17165 (KIL00_17165) - 3257207..3257575 (+) 369 WP_046381300.1 hypothetical protein -
  KIL00_RS17170 (KIL00_17170) pdeH 3257551..3258780 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89322.80 Da        Isoelectric Point: 8.2618

>NTDB_id=568942 KIL00_RS17140 WP_213783444.1 3253042..3255351(-) (comP) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MKNLIKKFTIAVIVLSILYISYTTYISMNGIIIGTKIHKNDKSQFMIEEISESSYGQFVGLRQGDIILKINKEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLFFYFLSIICIFYILKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQRYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATLN
LVSFATLTLFSFSAIYLHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMDIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEVGPDWNFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVLHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDENPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=568942 KIL00_RS17140 WP_213783444.1 3253042..3255351(-) (comP) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
TTGAAGAACTTAATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTTTATATAAGCTATACAACTTATATCAG
TATGAATGGAATTATTATTGGGACTAAGATTCATAAAAATGATAAAAGTCAATTTATGATAGAAGAAATATCGGAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGACATCATATTAAAAATTAATAAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGTTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAAGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGCGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAAGATACCTTGGAGAAATAGGTAAAACTTTTTTGAATAGAATTTCTTTTCTTTATA
TCATACCAATATTTAATCTTGGTATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCAACTCTTAAT
TTGGTTTCTTTTGCAACTTTGACTCTATTTTCTTTTTCAGCGATATACTTACATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTCTTTCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACCAAC
TCTTCTAATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGACATCCAGATGAACCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATTTTTAAATATACTCAGCTAATGAGGGGTGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAGTTGGACCGGACTGGAATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATTGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGCGGTAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCCCGGCTAACACGTGATGAAATATCGTGGCTGAAAACACTGTCTTTTTATACAAGTGTGTCCATGGAAAATGTCC
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAA
ACGCCAGTGTGAGCTGTTTCTGGGTGATTTCAAGAAGGATGAAAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTGC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGC
GTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

99.87

100

0.999