Detailed information NTG0568809

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ML603_RS09800
• Genome accession: NZ_CP092887
• Coordinates: 1985281..1986387 (+)
• Length: 368 a.a.
• NCBI ID: WP_143928114.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain Karl
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1980281..1991387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ML603_RS09775 (ML603_09775)	pgsA	1980391..1980933 (-)	543	WP_143928110.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ML603_RS09780 (ML603_09780)	-	1980947..1981978 (-)	1032	WP_241067256.1	helix-turn-helix domain-containing protein	-
ML603_RS09785 (ML603_09785)	-	1982028..1983311 (-)	1284	WP_241067257.1	pitrilysin family protein	-
ML603_RS09790 (ML603_09790)	-	1983313..1984557 (-)	1245	WP_241067258.1	pitrilysin family protein	-
ML603_RS09795 (ML603_09795)	yaaA	1984866..1985279 (+)	414	WP_241067259.1	S4 domain-containing protein YaaA	-
ML603_RS09800 (ML603_09800)	recF	1985281..1986387 (+)	1107	WP_143928114.1	DNA replication/repair protein RecF	Machinery gene
ML603_RS09805 (ML603_09805)	-	1986443..1987306 (-)	864	WP_003055126.1	GRP family sugar transporter	-
ML603_RS09810 (ML603_09810)	guaB	1987518..1988999 (-)	1482	WP_003060436.1	IMP dehydrogenase	-
ML603_RS09815 (ML603_09815)	trpS	1989216..1990238 (-)	1023	WP_003055141.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41903.81 Da
• Isoelectric Point: 7.8271

>NTDB_id=568809 ML603_RS09800 WP_143928114.1 1985281..1986387(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQVDAAFLAVLDEQLASYGTRVMEHRIDFINALEKEANTHHQAISNGLENLSLSYQSSVVFDKKTNIYQHFLY
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=568809 ML603_RS09800 WP_143928114.1 1985281..1986387(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCATCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAAATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGCGTGACAAAGATTAATGCGCTAAAACAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAAGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAGCAAGTTGATGCGGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCTATCTCAAATG
GTTTAGAAAATCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAATATTTACCAACATTTTTTATAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAATACTAGTGTTGGCCCACATCGCGATGACTTGGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAACTAGACAATACACGACAA
ACAAAATTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTAGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGAAATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.187	98.913	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462