Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ML603_RS09010 Genome accession   NZ_CP092887
Coordinates   1820491..1820940 (-) Length   149 a.a.
NCBI ID   WP_003053369.1    Uniprot ID   A0ABU0A4B8
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1815491..1825940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS08990 (ML603_08990) - 1815565..1816011 (-) 447 WP_241067171.1 dUTP diphosphatase -
  ML603_RS08995 (ML603_08995) - 1816119..1816886 (-) 768 WP_015058074.1 epoxyqueuosine reductase QueH -
  ML603_RS09000 (ML603_09000) - 1817005..1818789 (-) 1785 WP_241067172.1 ABC transporter ATP-binding protein -
  ML603_RS09005 (ML603_09005) rcrP 1818789..1820498 (-) 1710 WP_129556327.1 ABC transporter ATP-binding protein Regulator
  ML603_RS09010 (ML603_09010) rcrR 1820491..1820940 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  ML603_RS09015 (ML603_09015) - 1821141..1822157 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  ML603_RS09020 (ML603_09020) hasC 1822189..1823091 (+) 903 WP_129556325.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  ML603_RS09025 (ML603_09025) - 1823272..1823898 (+) 627 WP_138126596.1 DUF6198 family protein -
  ML603_RS09030 (ML603_09030) - 1824075..1824749 (-) 675 WP_129556324.1 rhomboid family intramembrane serine protease -
  ML603_RS09035 (ML603_09035) - 1824746..1825273 (-) 528 WP_241067173.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17415.30 Da        Isoelectric Point: 9.5972

>NTDB_id=568801 ML603_RS09010 WP_003053369.1 1820491..1820940(-) (rcrR) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MSRVIADLRELTHQVEQISDEIAKKYDLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=568801 ML603_RS09010 WP_003053369.1 1820491..1820940(-) (rcrR) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGTCACGAGTAATTGCAGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAATATGA
CCTTGAACATTTAGCAGGACCCCAGGGACACGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAGG
ACATTGAAAAAGAACTCCAAATTTCAAAATCAGTTACCAGTAATCTTGTTAAACGCATGGTTAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGACAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGAGAGAAGCTGCCTTTGTTGCA
AGAATGTCGTAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTATAAAGGAGAGAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43