Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ML603_RS09005 Genome accession   NZ_CP092887
Coordinates   1818789..1820498 (-) Length   569 a.a.
NCBI ID   WP_129556327.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813789..1825498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS08985 (ML603_08985) radA 1814121..1815482 (-) 1362 WP_138126586.1 DNA repair protein RadA Machinery gene
  ML603_RS08990 (ML603_08990) - 1815565..1816011 (-) 447 WP_241067171.1 dUTP diphosphatase -
  ML603_RS08995 (ML603_08995) - 1816119..1816886 (-) 768 WP_015058074.1 epoxyqueuosine reductase QueH -
  ML603_RS09000 (ML603_09000) - 1817005..1818789 (-) 1785 WP_241067172.1 ABC transporter ATP-binding protein -
  ML603_RS09005 (ML603_09005) rcrP 1818789..1820498 (-) 1710 WP_129556327.1 ABC transporter ATP-binding protein Regulator
  ML603_RS09010 (ML603_09010) rcrR 1820491..1820940 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  ML603_RS09015 (ML603_09015) - 1821141..1822157 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  ML603_RS09020 (ML603_09020) hasC 1822189..1823091 (+) 903 WP_129556325.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  ML603_RS09025 (ML603_09025) - 1823272..1823898 (+) 627 WP_138126596.1 DUF6198 family protein -
  ML603_RS09030 (ML603_09030) - 1824075..1824749 (-) 675 WP_129556324.1 rhomboid family intramembrane serine protease -
  ML603_RS09035 (ML603_09035) - 1824746..1825273 (-) 528 WP_241067173.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63325.00 Da        Isoelectric Point: 5.9536

>NTDB_id=568800 ML603_RS09005 WP_129556327.1 1818789..1820498(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYNVGILLLIIALMGLIAGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEVLNTEPAMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFRIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=568800 ML603_RS09005 WP_129556327.1 1818789..1820498(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTTCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGATAAGATTTACAATGTGGGGA
TATTGTTGCTTATCATTGCGCTGATGGGATTGATTGCAGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCTCAAGGG
GTCTCAGCGGATATTCGTGAGAAGACCTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTAGAAGCTTTCAATGCTGG
GAACCTCGTGGTTCGGATGACCAATGATATTAATCAAATTCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTCCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTGTGGTGGGTGATTGTGCTGATGGTT
ATTTTGATTGGTCTTATCATGGCTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATCAATCGAATTGCTAAGGAAAATCTTCGTGGCGTGCGTGTGGTTAAATCTTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAATTATTAGATTTGAATCTCTTTATCGGATACGGTTTTTCGTTGATGCAACCTGCTTTG
ATGTTGGTATCTTATTTGGCAGTGTATGTGTCTATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACCGTTATTGG
GAATATTGCTTCTTTCATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTCGGCTTTATGGGCATGCAAGCTA
GTCGTGCCTTTGTCTCTATTGGTCGTCTCAAAGAGGTGCTCAATACTGAGCCAGCCATGACCTTTGACACCGAGCAAGAA
GAAGAGGTTTCAGGTAGTATTGTCTTTGAGGATGTCAGTTTTACTTATCCTAATGATGATGAGCCGACCTTACGCCATAT
TTCCTTTAGGATTGAACCTGGTCAAATGGTTGGTGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTGCTGGGAGGTAAACCGATTAAATCCTTGAGTCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTTTTTTCGGGAACCATTGCAGACAATCTCCGTCAAGGATCAGC
AACTGCAGATGATTATGCCATGGAACGAGCAGCGCGTATTGCTCAAGCCAAAGAATTTATCGATCGTATGGATGACCGCT
ATGAAAGCCAAGTGGAAGAACGGGGTAATAACTTCTCTGGTGGTCAAAAACAACGGATGTCGATTGCACGTGGTGTCATT
AACCAACCTAAGATTCTTGTATTGGATGACTCAACATCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATTATTGCCCAAAAGATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTAGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

34.746

100

0.36