Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ML603_RS08550 Genome accession   NZ_CP092887
Coordinates   1721130..1723466 (-) Length   778 a.a.
NCBI ID   WP_241067125.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1716130..1728466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS08530 (ML603_08530) - 1717501..1717794 (-) 294 WP_003052683.1 hypothetical protein -
  ML603_RS08535 (ML603_08535) mutY 1717961..1719127 (+) 1167 WP_138126470.1 A/G-specific adenine glycosylase -
  ML603_RS08540 (ML603_08540) trxA 1719178..1719492 (-) 315 WP_003052691.1 thioredoxin -
  ML603_RS08545 (ML603_08545) - 1719719..1721038 (+) 1320 WP_241067124.1 FAD-containing oxidoreductase -
  ML603_RS08550 (ML603_08550) mutS/mutS2 1721130..1723466 (-) 2337 WP_241067125.1 endonuclease MutS2 Machinery gene
  ML603_RS08555 (ML603_08555) - 1723622..1724167 (-) 546 WP_241067126.1 CvpA family protein -
  ML603_RS08560 (ML603_08560) - 1724170..1724478 (-) 309 WP_003052702.1 hypothetical protein -
  ML603_RS08565 (ML603_08565) rnhC 1724635..1725543 (+) 909 WP_241067127.1 ribonuclease HIII -
  ML603_RS08570 (ML603_08570) lepB 1725555..1726148 (+) 594 WP_012767541.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87086.65 Da        Isoelectric Point: 6.8612

>NTDB_id=568792 ML603_RS08550 WP_241067125.1 1721130..1723466(-) (mutS/mutS2) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MDKKILEQLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHYEKIKHYFLEIEEMAGIFVEQHHFALGSLSDISASMRRLEL
EADLSIPELLAVKKILQVSAEASRFYVDLENVQLQALKRLFENLELFPSLQGSLQAINDGGFVESFASPELEKIRRSISD
KEHASRNVLQDLLKKQGDYLSESLIASRNGRSVLPVKNTFRNKVAGVVHDISASGNTVYIEPRALVQLNEELTQLQADER
HEVSRVLQALSDLVRPHSRVLTNNAWILGHLDFVRAKYLYMRDNKATVPAISDDKSLQLLNVRHPLLQEPVANDLHFSKD
LAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
ADSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETPYVENASMEFDSKSLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVKEAQNMTDTDSDVNRIIEQLEKQTLESRKRLDHIREVEQDNLKFNRAVKKLYNEFSQAKDKE
IEKATLEAREIVDLALAESDSILNQLHDKAALKPHEVIEAKGQLKQLVPEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYG
QRGTLVKELKDKKWEAQVGLIKMTLKEDEFSLVKVVEEAQKPKKKAINVVKKAATGGGPRARLDLRGKRYEEAMQELDAF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=568792 ML603_RS08550 WP_241067125.1 1721130..1723466(-) (mutS/mutS2) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGGATAAAAAGATTTTAGAACAGTTAGAATTTGATAAGGTCAAAGAACAATTTCGGGCCTACCTGCAGACAGAGCAGGG
GAACCGTGAATTAGACCAACTCGAACCCCTCAATCATTATGAGAAAATCAAACATTACTTTTTAGAGATTGAAGAGATGG
CTGGCATTTTTGTAGAGCAACATCACTTTGCATTGGGTAGTCTGTCTGACATTTCAGCTAGCATGAGACGTTTGGAACTG
GAAGCTGATTTGAGCATTCCCGAATTATTAGCAGTCAAAAAAATACTTCAGGTATCAGCAGAAGCGAGTCGCTTTTATGT
TGATTTGGAAAACGTTCAGCTGCAAGCCTTGAAGCGTTTGTTTGAAAATCTGGAGCTTTTTCCTAGCCTTCAAGGCAGTC
TTCAGGCTATCAATGACGGTGGTTTTGTGGAAAGTTTTGCCAGTCCCGAGTTAGAAAAAATTCGTCGTAGCATCTCAGAC
AAAGAACATGCGAGCCGGAATGTCTTACAAGATTTACTCAAAAAGCAAGGTGACTATTTGTCAGAAAGCTTGATTGCTAG
CCGAAACGGGCGTAGTGTCTTACCTGTCAAAAACACTTTCCGTAATAAGGTCGCAGGGGTCGTTCACGATATTTCGGCTT
CAGGAAATACGGTTTATATTGAACCACGAGCTCTTGTTCAACTAAATGAAGAGCTGACGCAGTTACAAGCCGACGAACGC
CATGAAGTGTCACGTGTCCTTCAAGCCTTATCAGACCTTGTCAGACCTCATAGTCGAGTTCTTACCAATAATGCTTGGAT
TCTGGGGCATCTGGATTTTGTCAGAGCCAAATACCTCTATATGCGAGATAATAAGGCCACGGTCCCGGCTATTTCGGATG
ATAAAAGTTTACAGTTGTTAAATGTGCGCCACCCTCTTTTGCAGGAGCCAGTTGCTAATGATTTGCATTTCTCTAAAGAT
TTGGCTGTTATTGTGATTACTGGTCCGAATACTGGTGGTAAAACCATCATGCTAAAAACGCTTGGTTTAGCCCAGCTAAT
GGCCCAATCGGGTCTGCCTATTCTAGCTGATAAAGGTTCCAAAGTTGCTGTTTTTAGTGGTATTTTTGCTGATATTGGCG
ATGAACAATCCATTGAGCAGAGCTTATCAACTTTCTCTAGCCATATGACTCACATTGTTGCTATTTTGAATCAAGCTGAT
GCAGATAGTTTAGTACTCTTTGATGAGTTGGGGGCAGGAACAGATCCGCAAGAAGGAGCAAGTCTTGCTATGGCAATCTT
GGAGCAGTTACGCTTAACTAATATCAAAACCATGGCGACTACCCATTACCCTGAACTAAAAGCATATGGCATCGAAACCC
CCTATGTGGAAAATGCCAGTATGGAGTTCGATAGCAAGAGTTTAAAACCAACTTACCGCTTTATGCAGGGAGTTCCAGGT
CGTTCAAATGCCTTTGAAATTGCTAGACGCCTTGGGTTGGCAGAACACATTGTCAAAGAAGCTCAAAACATGACGGACAC
AGATAGTGATGTTAACCGTATTATCGAACAGTTAGAGAAACAAACTCTGGAGAGTCGTAAGCGGCTTGACCATATTCGAG
AAGTGGAGCAAGATAACCTCAAATTTAACCGTGCGGTCAAAAAATTGTACAATGAGTTCTCACAGGCCAAAGATAAGGAA
ATTGAAAAAGCTACCCTTGAAGCGCGTGAGATCGTAGACTTAGCTTTAGCAGAAAGTGACAGTATTTTAAACCAGTTGCA
TGACAAAGCTGCACTTAAACCTCACGAAGTTATTGAAGCCAAGGGGCAACTCAAACAGTTAGTGCCAGAAAAGAGTCTTT
CTCAAAACAAGGTCCTAAAGAAAGCGAAGCAATTACGAGCTCCTCGAGTAGGAGACGATATTATTGTAACAGCCTATGGC
CAAAGAGGAACCTTGGTAAAAGAACTCAAAGATAAGAAGTGGGAAGCGCAAGTTGGACTGATCAAAATGACCCTCAAAGA
AGATGAATTTAGTCTTGTGAAGGTTGTTGAAGAAGCTCAAAAACCAAAGAAAAAAGCCATCAACGTGGTCAAGAAGGCTG
CTACTGGTGGTGGTCCTCGTGCCCGTCTGGATTTGCGTGGCAAACGGTATGAAGAAGCGATGCAAGAACTAGACGCCTTT
ATTGACCAAGCTCTCTTAAATAACATGAGCCAAGTGGATATTATTCATGGGATTGGCACTGGTGTAATCCGTGAAGCTGT
TACCAAATACCTCAGACGAAACAAACATGTTAAAAGCTTTGGTTATGCTCCACAGAATGCGGGTGGATCAGGGTGTACCA
TTGCGAACTTAGGGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.253

100

0.409