Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   KIP84_RS03410 Genome accession   NZ_CP075323
Coordinates   694129..698658 (+) Length   1509 a.a.
NCBI ID   WP_213689335.1    Uniprot ID   -
Organism   Acinetobacter sp. BHS4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 689129..703658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP84_RS03385 (KIP84_03385) - 689569..690207 (-) 639 WP_213689334.1 hypothetical protein -
  KIP84_RS03390 (KIP84_03390) pilG 690491..690874 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  KIP84_RS03395 (KIP84_03395) - 690898..691260 (+) 363 WP_046811934.1 response regulator -
  KIP84_RS03400 (KIP84_03400) - 691317..691853 (+) 537 WP_069124013.1 chemotaxis protein CheW -
  KIP84_RS03405 (KIP84_03405) - 691900..693981 (+) 2082 WP_068565018.1 methyl-accepting chemotaxis protein -
  KIP84_RS03410 (KIP84_03410) chpA 694129..698658 (+) 4530 WP_213689335.1 Hpt domain-containing protein Regulator
  KIP84_RS03415 (KIP84_03415) - 698655..699122 (+) 468 WP_199113899.1 hypothetical protein -
  KIP84_RS03420 (KIP84_03420) - 699430..700311 (+) 882 WP_213689336.1 alpha/beta fold hydrolase -
  KIP84_RS03425 (KIP84_03425) dapE 700447..701583 (-) 1137 WP_213689337.1 succinyl-diaminopimelate desuccinylase -
  KIP84_RS03430 (KIP84_03430) - 701710..701853 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  KIP84_RS03435 (KIP84_03435) - 701977..702858 (-) 882 WP_086265172.1 DUF1853 family protein -
  KIP84_RS03440 (KIP84_03440) - 702963..703331 (+) 369 WP_086265171.1 YbaN family protein -

Sequence


Protein


Download         Length: 1509 a.a.        Molecular weight: 172354.12 Da        Isoelectric Point: 4.3276

>NTDB_id=568766 KIP84_RS03410 WP_213689335.1 694129..698658(+) (chpA) [Acinetobacter sp. BHS4]
MKEILKTLTEAMMLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMRSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYLEQDSLAESIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEQLFKILLQEELSSNSDEILLLQEYRDFIGESLELLSSNSSSEQLEVRLEQFNQSWDVYVEE
HSDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLSQQNFTFDESLFNIEL
ESEVPEVIRVENLSDSADWTLLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGMDTDLNIWINDQENFAALNN
LMRYLHTLKGGANMIQAIYIGLIAHELESIYERLIQRQLIASSALIDFIRLVQDDLADRLQIMREKQLDYEAYYTINALK
RACQNSNFQSAPEIEVSDIEREIFSEQEVISEVLIDEVPAEIEAVIEELEAHHDQVFDTVVTELAAPVEAITSVVSSHEN
DALVDEEDITAVVEQTFLEEAAELLEMADMLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVDLEAVYAIAYQLENAFEQ
FALHHFNSNIYDHLLESAIAWLKDAIFKYNYQHFDGLQQSLENIQFFETNIQIPAKLSKADLFSSEPVMTFIQGDGTEPP
PMMGAWEQTQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQII
AKHGIEHSRYTEFDPLEMDRYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSR
LLPRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRVQRQQTQKPETGRIELNIHRQG
TDVVVTFKDDGRGIDIEKVRQKALMFGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVS
VESVYGQGTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSVQEFFEFENKRYPLRYLSEFVG
SQPIPRLSGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQI
QSTRRLKLVNEAVYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMD
GFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4530 bp        

>NTDB_id=568766 KIP84_RS03410 WP_213689335.1 694129..698658(+) (chpA) [Acinetobacter sp. BHS4]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTCGTCGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTGCTAAATGAATGGATGCGGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCATACCTTAAAAGGTTCTGGGAGAATGATTGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTCAATCGAGTAATCAATCAAAGCCTTAAGTTGACTCCAGCTATCCAGAGTTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATAACTGGACTTGAGCTAGACTATCTTGAGCAAGATTCATTGGCTGAGTCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACCTTAGCCTTATTTATGGAAGAAGCGGAGGAGCATTTATCGA
CAATTAATCAGTTCTTAAATCAAGAGCTACATCAGTATGATAGTTACAATGCTTTAATACGTGCTCTACATACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCAGTTATTTAAAATCTTATTACA
AGAAGAACTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGCGATTTTATTGGAGAGAGCTTAGAGCTGC
TATCTAGCAATAGTTCAAGTGAACAGCTTGAAGTGAGATTAGAGCAGTTTAATCAATCATGGGATGTCTACGTTGAGGAG
CATAGTGATCGAACAGATCCATTAATGCCTTCACATGGTTTGGTATCGCAATTATTACTGTTAGATGTTTCTGAGCTACT
CGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATT
TGTTGCTACAGCATACCCACTCTCAAGCAATGCTAGGTTTACATGAATATACGAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTGTTATTGCAATCGGACTATATTTTTGAAATTTATCAAAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTCGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGCTACATACACCTAGTATTCAAAATGATTTATCTCAGCAGAATTTTACTTTTGATGAGTCACTATTCAATATTGAACTA
GAGTCTGAAGTTCCAGAAGTTATTAGAGTAGAGAATTTATCAGACTCTGCTGACTGGACCCTATTAAGCCAAAGTGTACA
GCAAGATCGTCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCAGATCTATTAGATATTTTCCTCGAAGAAG
CTGATGAGTTGCTTGAAGGAATGGATACAGATCTTAATATTTGGATTAATGATCAAGAGAACTTTGCGGCTCTCAATAAT
TTGATGCGTTATTTGCACACCTTAAAAGGTGGAGCAAATATGATCCAAGCAATTTATATTGGCTTAATTGCACATGAATT
GGAAAGTATTTATGAGCGATTAATTCAAAGACAGCTAATTGCTTCATCTGCTCTCATTGATTTTATACGTCTGGTTCAAG
ATGACTTGGCTGACCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGAAGCTTATTACACAATTAACGCATTGAAA
AGAGCATGTCAAAACTCTAACTTCCAATCTGCACCTGAGATTGAAGTATCTGATATTGAACGTGAGATATTCTCTGAACA
AGAGGTGATATCTGAAGTATTAATAGATGAAGTACCGGCAGAAATTGAAGCTGTTATTGAAGAATTAGAAGCTCATCATG
ATCAAGTATTTGATACAGTTGTTACTGAATTGGCTGCGCCAGTTGAAGCAATAACATCAGTTGTATCGTCGCACGAGAAT
GACGCTCTGGTTGATGAAGAGGACATTACTGCTGTTGTTGAGCAGACATTCCTTGAAGAAGCTGCTGAATTGTTAGAAAT
GGCTGATATGCTATTGAAACAATGGTTTGATCAGCGTACGAATCGTAGTATCTTGCTTCAATTACAAAGGGCCGTGCACA
GCTTGAAGGGTGGTGCACGAATGGTTGATTTAGAAGCCGTGTATGCGATTGCCTATCAACTTGAGAATGCTTTTGAACAA
TTTGCACTACATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGACGCAATTTT
CAAGTACAACTACCAGCATTTCGATGGACTACAACAAAGTCTGGAAAATATTCAATTCTTTGAAACGAATATCCAAATTC
CAGCTAAGTTAAGTAAAGCTGATTTGTTTAGCTCAGAACCCGTGATGACCTTTATACAAGGTGATGGTACAGAACCACCG
CCAATGATGGGAGCATGGGAACAAACTCAACGGCTCGATCAAAATAATGAGATGATCCGAGTTTCGGCAGATTTAATTGA
AAAAATGATTGATCTGTCGGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGACATACGC
TAGCGGAAATGGAATTGGCCATTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGTGAATTGGAAACCCAAATTATT
GCAAAACACGGTATTGAGCACTCTCGATATACGGAGTTTGATCCGTTAGAGATGGATCGATATTCGTCTTTAAATCAATT
ATCAAAATCTCTTGCTGAATCTGCATCGGATTTGGTCGACTTTAAAAATACATTATCTGACAAAATCAGAGATACAGAAA
GCTTACTTTTACAACAGTCACGGATTCAAGCAGAAATTCAAGAAGGTTTGATGCGAACGCGATTAGTACCTTTCTCTCGA
TTACTGCCGCGTTTACAGCGAATTGTCCGTCAGACATCTACAGCTTTGAACAGACCTGCAGAGCTTTTTGTAAATAATAC
CGAAGGTGAGTTAGATCGCAATATTTTAGAACGGTTAGTGACCCCGCTTGAGCATATGCTCAGAAATGCAATTGACCATG
GTCTAGAAGATCGCGTGCAACGTCAACAAACACAAAAACCAGAAACTGGACGTATTGAACTTAATATCCATCGTCAAGGT
ACAGATGTTGTTGTGACATTTAAGGATGATGGAAGAGGTATTGATATCGAAAAGGTTCGTCAAAAGGCATTGATGTTTGG
TTTAATTAATCCTGAACAAGTATTGGAACATCAAGATATTTTACAGTTGATTTTCCATCCGGGTTTAAGTACAGCTGATC
AAGTTACTCAAATTTCAGGTCGTGGTGTAGGACTGGATGTAGTACAAAGTGATATTAAGGCTCTAGGTGGCCATGTGAGC
GTAGAGTCTGTGTATGGGCAGGGAACGGTCTTTACAATACGTGTTCCAACTACAGTAGCGGTTAGTGATGCCTTAATGGT
TAAAGTTGCTGATCAGCAATTTGCAATCCCTCTGGCCCAAATTGATCGAATTGTACGAGTTTCACCTGCATCATTAGAAC
AATATTTTGGAAGCGTACAAGAATTCTTTGAATTTGAAAATAAACGCTATCCATTGCGCTATTTATCTGAATTTGTTGGT
AGTCAACCAATTCCGCGTTTAAGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGCCAAACTGT
CGCATTATTAGTTGACCAACTGATTGGATCACGTGCACAGATTGTAGTCAAACCAATTGGGCAGCAGTTCTCTAGTATCG
GTGCGATTGCAGGAGCAACTATTTTAGGTGATGGTCAAGTTTGCTTAATTTTAGATGGTCAAAATATTGCTCGCCAAATT
CAGTCTACTCGTCGACTTAAGCTGGTTAATGAAGCGGTTTATAGACAACGAGAGTCTGATGAGCGACGTCTCATCATGAT
TGTGGATGACTCAGTAACTGTGCGTAAAGTAACCTCTCGTTTACTCGAGCGCCAAGGCTATGATGTTGTGACCGCTAAAG
ATGGTGTGGATGCTATAGAGCAGCTAGAAAACATTAAGCCAGATCTGATGCTGCTTGATATTGAAATGCCACGCATGGAT
GGTTTTGAAGTTCTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCCGAACAGG
TGAAAAACATCGTGAACGAGCATTCTCATTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAATTATTAG
AGAATATCGATGCTTTACTTGTGGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

89.066

100

0.891