Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KI608_RS18630 Genome accession   NZ_CP075192
Coordinates   3887082..3887456 (-) Length   124 a.a.
NCBI ID   WP_226451914.1    Uniprot ID   -
Organism   Ferribacterium limneticum strain 132     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3882082..3892456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI608_RS18615 (KI608_18560) - 3884030..3886147 (-) 2118 WP_226448868.1 methyl-accepting chemotaxis protein -
  KI608_RS18620 (KI608_18565) - 3886185..3886697 (-) 513 WP_226448870.1 chemotaxis protein CheW -
  KI608_RS18625 (KI608_18570) - 3886702..3887067 (-) 366 WP_226448872.1 response regulator transcription factor -
  KI608_RS18630 (KI608_18575) pilG 3887082..3887456 (-) 375 WP_226451914.1 PleD family two-component system response regulator Regulator
  KI608_RS18635 (KI608_18580) - 3887685..3888560 (+) 876 WP_226448874.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  KI608_RS18640 (KI608_18585) thiE 3888547..3889182 (+) 636 WP_226448876.1 thiamine phosphate synthase -
  KI608_RS18645 (KI608_18590) hemL 3889179..3890462 (+) 1284 WP_226448878.1 glutamate-1-semialdehyde 2,1-aminomutase -
  KI608_RS18650 (KI608_18595) sugE 3890459..3890797 (+) 339 WP_226448880.1 quaternary ammonium compound efflux SMR transporter SugE -
  KI608_RS18655 (KI608_18600) mgtE 3890888..3892330 (-) 1443 WP_226448882.1 magnesium transporter -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 13660.75 Da        Isoelectric Point: 5.8334

>NTDB_id=568610 KI608_RS18630 WP_226451914.1 3887082..3887456(-) (pilG) [Ferribacterium limneticum strain 132]
MVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALAKIADHQPSVIFCDIMMPRLDGYQTCSLIKKNPRFKATPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLQTVAAFALPAETESNS

Nucleotide


Download         Length: 375 bp        

>NTDB_id=568610 KI608_RS18630 WP_226451914.1 3887082..3887456(-) (pilG) [Ferribacterium limneticum strain 132]
ATGGTCATCGACGACAGCAACACCATACGGCGTAGCGCCGAGATTTTTCTCGTCCAGGCCGGGTGTCAGGTCGTTCTGGC
TGAAGACGGGTTTGACGCGCTGGCCAAGATTGCCGATCACCAGCCCAGCGTGATCTTCTGCGACATCATGATGCCTCGTC
TGGATGGCTATCAGACCTGTTCCCTGATCAAGAAAAACCCACGTTTCAAGGCCACGCCAGTGATCATGCTCTCCTCCAAG
GATGGCCTGTTCGACCGGGCGCGGGGGCGTATGGTCGGTTCCGATCAGTACCTGACCAAACCATTTACCAAAGATAGCCT
GCTGCAGACGGTTGCCGCCTTCGCATTGCCGGCTGAAACAGAATCCAATTCGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.766

89.516

0.589
  pilH Synechocystis sp. PCC 6803

40.541

89.516

0.363