Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KI610_RS18520 Genome accession   NZ_CP075189
Coordinates   3860830..3861204 (-) Length   124 a.a.
NCBI ID   WP_226405783.1    Uniprot ID   -
Organism   Ferribacterium limneticum strain 77     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3855830..3866204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI610_RS18505 (KI610_18420) - 3857782..3859893 (-) 2112 WP_226496409.1 methyl-accepting chemotaxis protein -
  KI610_RS18510 (KI610_18425) - 3859932..3860444 (-) 513 WP_226496410.1 chemotaxis protein CheW -
  KI610_RS18515 (KI610_18430) - 3860450..3860815 (-) 366 WP_226496411.1 response regulator transcription factor -
  KI610_RS18520 (KI610_18435) pilG 3860830..3861204 (-) 375 WP_226405783.1 PleD family two-component system response regulator Regulator
  KI610_RS18525 (KI610_18440) - 3861428..3862306 (+) 879 WP_226496412.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  KI610_RS18530 (KI610_18445) thiE 3862296..3862928 (+) 633 WP_226496413.1 thiamine phosphate synthase -
  KI610_RS18535 (KI610_18450) hemL 3862925..3864208 (+) 1284 WP_226496414.1 glutamate-1-semialdehyde 2,1-aminomutase -
  KI610_RS18540 (KI610_18455) sugE 3864205..3864543 (+) 339 WP_226496415.1 quaternary ammonium compound efflux SMR transporter SugE -
  KI610_RS18545 (KI610_18460) mgtE 3864593..3866035 (-) 1443 WP_226496416.1 magnesium transporter -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 13676.79 Da        Isoelectric Point: 5.8334

>NTDB_id=568538 KI610_RS18520 WP_226405783.1 3860830..3861204(-) (pilG) [Ferribacterium limneticum strain 77]
MVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALAKIADHQPSVIFCDIMMPRLDGYQTCSLIKKNPKFKATPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLQTVATFALPAETESNT

Nucleotide


Download         Length: 375 bp        

>NTDB_id=568538 KI610_RS18520 WP_226405783.1 3860830..3861204(-) (pilG) [Ferribacterium limneticum strain 77]
ATGGTCATTGACGACAGCAATACAATACGGCGTAGCGCCGAGATTTTTCTCGTCCAGGCGGGCTGTCAGGTTGTACTGGC
CGAAGATGGGTTCGATGCGTTGGCCAAGATTGCCGACCATCAGCCCAGCGTCATCTTTTGCGACATCATGATGCCGCGTC
TTGATGGCTACCAGACCTGCTCGCTGATCAAGAAAAATCCCAAATTCAAGGCCACGCCGGTCATCATGCTTTCCTCAAAG
GACGGCTTGTTCGACCGGGCGCGCGGGCGCATGGTCGGTTCCGACCAGTACCTGACCAAACCATTCACAAAAGACAGCCT
GCTGCAAACGGTCGCCACGTTTGCTCTGCCGGCCGAGACAGAATCCAATACGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.766

89.516

0.589
  pilH Synechocystis sp. PCC 6803

41.441

89.516

0.371