Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   KIP81_RS05040 Genome accession   NZ_CP075172
Coordinates   1004754..1006079 (-) Length   441 a.a.
NCBI ID   WP_243602475.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 999754..1011079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS05015 (KIP81_05015) - 1000307..1001362 (-) 1056 WP_243602472.1 BMP family protein -
  KIP81_RS05020 (KIP81_05020) deoC 1001551..1002216 (-) 666 WP_243602473.1 deoxyribose-phosphate aldolase -
  KIP81_RS05025 (KIP81_05025) - 1002719..1003309 (-) 591 WP_243602474.1 class I SAM-dependent methyltransferase -
  KIP81_RS05030 (KIP81_05030) coaA 1003423..1004343 (+) 921 WP_033152659.1 type I pantothenate kinase -
  KIP81_RS05035 (KIP81_05035) rpsT 1004419..1004670 (+) 252 WP_004231769.1 30S ribosomal protein S20 -
  KIP81_RS05040 (KIP81_05040) ciaH 1004754..1006079 (-) 1326 WP_243602475.1 HAMP domain-containing sensor histidine kinase Regulator
  KIP81_RS05045 (KIP81_05045) ciaR 1006069..1006743 (-) 675 WP_074450515.1 response regulator transcription factor Regulator
  KIP81_RS05050 (KIP81_05050) - 1006897..1009440 (-) 2544 WP_243602476.1 M1 family metallopeptidase -
  KIP81_RS05055 (KIP81_05055) phoU 1009649..1010302 (-) 654 WP_024344053.1 phosphate signaling complex protein PhoU -

Sequence

Protein


Download         Length: 441 a.a.        Molecular weight: 50143.03 Da        Isoelectric Point: 7.5434

>NTDB_id=568249 KIP81_RS05040 WP_243602475.1 1004754..1006079(-) (ciaH) [Streptococcus equinus strain SheepZ001]
MLNNIQKKLSTGTFSHFFHFFAVFTGIFVIMTIIILQIMRYGLYSSVDTTLQNAANNASDYVTRTMERSDSIQSDNTINQ
SGKNKPSSNDGLSNVSVLLYDCNGKIVNALDAFIQFGSLTTSVNDDKIGEISEEKMTTIFGQTEKYHVLTVRVYSSDYPT
IQYATFLISVRQLDEANERYVTITITVMVIFWIISILASVYLANWTRKPILESYEKQKRFVENASHELRTPLAVLQNRLE
SLFRRPDATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEEIHPSTFNEIFENYQMIAHENNKKFTAHNLA
NRPIKSDKTLLKQLMTILFDNAIKYTGDDGVIEFTIKTTERQTILTIADNGPGVSDADKQKIFDRFYRVDKARTRQQGGF
GLGLSLAKQIVDALKGDIQVKDNNPKGTIFEVRFNRHNFGK

Nucleotide


Download         Length: 1326 bp        

>NTDB_id=568249 KIP81_RS05040 WP_243602475.1 1004754..1006079(-) (ciaH) [Streptococcus equinus strain SheepZ001]
ATGCTGAATAATATACAGAAAAAATTATCTACGGGAACTTTCTCACACTTTTTCCATTTTTTTGCTGTGTTTACAGGGAT
TTTCGTTATTATGACAATTATTATCCTGCAAATCATGCGATATGGTTTATATTCTTCTGTCGACACGACGTTACAAAACG
CTGCTAATAATGCTAGTGATTATGTTACGAGAACGATGGAGAGAAGTGACTCGATTCAATCCGATAATACGATTAATCAA
TCTGGGAAAAATAAACCGAGTTCAAATGATGGATTGAGTAATGTTAGTGTCCTTTTGTATGATTGCAACGGTAAAATAGT
TAATGCTTTAGATGCCTTTATTCAATTTGGCTCACTAACGACGAGCGTTAATGATGATAAAATCGGTGAAATAAGCGAAG
AGAAGATGACTACGATTTTCGGTCAAACTGAAAAGTATCATGTCTTGACTGTCAGAGTTTATAGCAGTGATTATCCAACA
ATTCAATACGCAACCTTTCTAATTAGTGTTCGTCAGCTTGACGAGGCAAATGAAAGATATGTGACAATTACTATTACAGT
TATGGTTATCTTTTGGATTATTTCAATTTTGGCGAGTGTTTATCTTGCAAACTGGACTCGTAAACCAATTCTTGAAAGTT
ATGAAAAGCAGAAACGCTTTGTTGAGAATGCCAGTCATGAGTTGAGAACACCGCTTGCTGTTTTGCAAAATCGTCTTGAA
AGTTTGTTTAGACGTCCAGATGCAACAATTTTAGATAATAGCGAAAGTATTGCTGCAAGTCTTGATGAAGTGCGAAATAT
GCGTATTCTGACAACAAATCTTTTAAATCTTGCTAGACGTGATGACGGTTTGAAAGTTGAATTGGAAGAGATTCATCCAT
CAACCTTTAACGAGATTTTTGAAAATTATCAGATGATTGCTCACGAAAATAATAAAAAGTTTACTGCACACAATTTAGCT
AATCGTCCGATAAAATCAGATAAGACTCTTTTGAAACAACTAATGACTATTTTATTTGATAATGCCATTAAGTACACTGG
TGATGATGGCGTTATTGAATTTACCATTAAAACAACAGAACGCCAAACTATTTTAACTATTGCTGATAACGGACCTGGTG
TTAGTGATGCCGATAAGCAGAAGATTTTTGATCGCTTTTACCGTGTCGACAAGGCAAGGACGCGCCAACAAGGTGGATTT
GGTTTGGGGTTGTCTCTAGCGAAGCAAATTGTTGATGCTTTGAAGGGTGATATTCAGGTTAAAGATAACAATCCAAAAGG
AACTATTTTTGAAGTTCGTTTCAATAGACATAATTTTGGTAAATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(217-283)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(327-434)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.217

98.413

0.583
  ciaH Streptococcus pneumoniae Rx1

51.606

98.866

0.51
  ciaH Streptococcus pneumoniae D39

51.606

98.866

0.51
  ciaH Streptococcus pneumoniae R6

51.606

98.866

0.51
  ciaH Streptococcus pneumoniae TIGR4

51.606

98.866

0.51