Detailed information NTG0568043

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: MK801_RS05845
• Genome accession: NZ_CP092748
• Coordinates: 1135556..1136626 (+)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis strain 17M1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1130556..1141626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MK801_RS05820 (MK801_05815)	-	1131156..1131473 (+)	318	WP_057720844.1	helix-turn-helix transcriptional regulator	-
MK801_RS05825 (MK801_05820)	-	1131470..1132147 (+)	678	WP_057720843.1	type 1 glutamine amidotransferase domain-containing protein	-
MK801_RS05830 (MK801_05825)	-	1132148..1133062 (+)	915	WP_057720842.1	NAD-dependent epimerase/dehydratase family protein	-
MK801_RS05835 (MK801_05830)	xerS	1133648..1134703 (+)	1056	WP_254255848.1	tyrosine recombinase XerS	Machinery gene
MK801_RS05840 (MK801_05835)	-	1134787..1135074 (+)	288	WP_015426413.1	hypothetical protein	-
MK801_RS05845 (MK801_05840)	xerS	1135556..1136626 (+)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
MK801_RS05850 (MK801_05845)	trmFO	1136671..1138014 (-)	1344	WP_025017071.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
MK801_RS05855 (MK801_05850)	topA	1138086..1140218 (-)	2133	WP_023189256.1	type I DNA topoisomerase	-
MK801_RS05860 (MK801_05855)	dprA	1140480..1141328 (-)	849	WP_057720839.1	DNA-processing protein DprA	Machinery gene

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=568043 MK801_RS05845 WP_003131037.1 1135556..1136626(+) (xerS) [Lactococcus lactis strain 17M1]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=568043 MK801_RS05845 WP_003131037.1 1135556..1136626(+) (xerS) [Lactococcus lactis strain 17M1]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTCATCCTCTATCTTAGGGAGAGACCTCGTTTAAATACGCGCTCTACCCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATACGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTAACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGTAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGTCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCATTTAAAGTACGAGTGACCCCTCACAAACTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767