Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   MID12_RS12240 Genome accession   NZ_CP092644
Coordinates   3232363..3233487 (+) Length   374 a.a.
NCBI ID   WP_040249887.1    Uniprot ID   A0ABX1H8E1
Organism   Streptomyces sp. SCSIO ZS0520     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3227363..3238487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MID12_RS12225 - 3227650..3228552 (+) 903 WP_263173098.1 hypothetical protein -
  MID12_RS12230 - 3228828..3230663 (-) 1836 WP_263166911.1 BACON domain-containing protein -
  MID12_RS12235 radA/sms 3230886..3232295 (+) 1410 WP_040249885.1 DNA repair protein RadA Machinery gene
  MID12_RS12240 disA 3232363..3233487 (+) 1125 WP_040249887.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  MID12_RS12245 - 3233738..3234190 (+) 453 WP_263166915.1 hypothetical protein -
  MID12_RS12250 - 3234340..3235014 (+) 675 WP_263166918.1 hypothetical protein -
  MID12_RS12255 - 3235132..3236940 (-) 1809 WP_040249889.1 glycoside hydrolase family 15 protein -
  MID12_RS12260 - 3237129..3237542 (+) 414 WP_263166921.1 RidA family protein -
  MID12_RS12265 - 3237647..3237874 (+) 228 WP_263166924.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40121.88 Da        Isoelectric Point: 4.9304

>NTDB_id=567633 MID12_RS12240 WP_040249887.1 3232363..3233487(+) (disA) [Streptomyces sp. SCSIO ZS0520]
MAANDRAAAPGKSGGSSGAEGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDVTKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTARRSRTVDEALSELDALTHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=567633 MID12_RS12240 WP_040249887.1 3232363..3233487(+) (disA) [Streptomyces sp. SCSIO ZS0520]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGCGGGAGTTCCGGTGCCGAGGGGCTGATGCGTGCCTCGCT
GAGCGCGGTCGCACCCGGTACCGCCCTGCGGGACGGCCTGGAGCGGATCCTCCGCGGCAACACCGGAGGCCTCATCGTCC
TCGGCTCCGACAAGACCGTCGAGTCGATGTGTACGGGCGGCTTCGTGCTCGACGTCGAGTTCACGGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACGTCACCAAGATCCTGCGCGCCGGGGTGCAGCTGGTGCC
CGACCCGACGATCCCGACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAACAGGTCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTCTACGTGGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCACCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTGGGCACCGACGGCCGCCTGCTCGCCCTCCAGCTGGAGGAGCTGATCGCG
GGCGTCGAACCGGACCGCGAACTCGTCGTCCGCGACTACGTCCCCGAGCCCACCGCCCGCCGCTCCCGCACCGTGGACGA
GGCCCTGTCCGAACTGGACGCCCTCACCCACGCCGAACTCCTCGAACTGCCCACCGTGGCCCGCGCCTTGGGCTACACCG
GCTCCCCCGAGGCCCTCGACTCCGCCGTCTCCCCCCGCGGCTTCCGCCTGCTCGCCAAGGTCCCCCGGCTGCCCGGCGCG
ATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTGCAGAAACTCCTCGCGGCGAGCGTGGACGACCTCCAGACCGTCGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTGTCCCGGCTCGCGGAGTCGTCGATTCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

92.513

0.422