Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   MKS87_RS19920 Genome accession   NZ_CP092631
Coordinates   3826151..3826525 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain YB-15     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3821151..3831525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKS87_RS19895 (MKS87_19895) - 3821315..3821476 (-) 162 WP_003227632.1 hypothetical protein -
  MKS87_RS19900 (MKS87_19900) glpX 3821691..3822656 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  MKS87_RS19905 (MKS87_19905) murAB 3822687..3823976 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  MKS87_RS19910 (MKS87_19910) fsa 3824355..3824993 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  MKS87_RS19915 (MKS87_19915) fbaA 3825113..3825970 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  MKS87_RS19920 (MKS87_19920) letA 3826151..3826525 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  MKS87_RS19925 (MKS87_19925) ywjG 3826691..3827212 (+) 522 WP_024572667.1 DUF2529 domain-containing protein -
  MKS87_RS19930 (MKS87_19930) pyrG 3827294..3828901 (-) 1608 WP_110109502.1 CTP synthase (glutamine hydrolyzing) -
  MKS87_RS19935 (MKS87_19935) rpoE 3829143..3829664 (-) 522 WP_003227609.1 DNA-directed RNA polymerase subunit delta -
  MKS87_RS19940 (MKS87_19940) acdA 3829847..3830986 (-) 1140 WP_110109503.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=567422 MKS87_RS19920 WP_003227621.1 3826151..3826525(-) (letA) [Bacillus subtilis strain YB-15]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=567422 MKS87_RS19920 WP_003227621.1 3826151..3826525(-) (letA) [Bacillus subtilis strain YB-15]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCTGGCATGGACGGAATCGAAATCCTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363