Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   MKS87_RS09745 Genome accession   NZ_CP092631
Coordinates   1949172..1951175 (+) Length   667 a.a.
NCBI ID   WP_173614115.1    Uniprot ID   -
Organism   Bacillus subtilis strain YB-15     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1944172..1956175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKS87_RS09705 (MKS87_09705) pghL 1944534..1945292 (+) 759 WP_173614113.1 gamma-polyglutamate hydrolase PghL -
  MKS87_RS09710 (MKS87_09710) - 1945319..1945768 (-) 450 WP_003245454.1 YndM family protein -
  MKS87_RS09715 (MKS87_09715) fosB 1945977..1946411 (+) 435 WP_173614114.1 metallothiol transferase FosB -
  MKS87_RS09720 (MKS87_09720) - 1946320..1946597 (+) 278 Protein_1860 hypothetical protein -
  MKS87_RS09725 (MKS87_09725) dinR/lexA 1946950..1947567 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  MKS87_RS09730 (MKS87_09730) yneA 1947717..1948034 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  MKS87_RS09735 (MKS87_09735) dinL 1948053..1948706 (+) 654 WP_015714011.1 recombinase family protein -
  MKS87_RS09740 (MKS87_09740) ynzC 1948770..1949003 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  MKS87_RS09745 (MKS87_09745) recP/tkt 1949172..1951175 (+) 2004 WP_173614115.1 transketolase Machinery gene
  MKS87_RS09750 (MKS87_09750) sirA 1951328..1951774 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  MKS87_RS09755 (MKS87_09755) yneF 1951860..1952078 (+) 219 WP_003221221.1 YneF family protein -
  MKS87_RS09760 (MKS87_09760) ynzD 1952152..1952325 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  MKS87_RS09765 (MKS87_09765) ccdA 1952545..1953252 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  MKS87_RS09770 (MKS87_09770) yneI 1953341..1953703 (+) 363 WP_003245707.1 response regulator -
  MKS87_RS09775 (MKS87_09775) yneJ 1953782..1954273 (+) 492 WP_010886519.1 CcdC family protein -
  MKS87_RS09780 (MKS87_09780) yneK 1954304..1954732 (-) 429 WP_173614116.1 DynA interaction protein YneK -
  MKS87_RS09785 (MKS87_09785) cotM 1954967..1955359 (-) 393 WP_072174018.1 outer spore coat protein CotM -
  MKS87_RS09790 (MKS87_09790) sspP 1955440..1955586 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  MKS87_RS09795 (MKS87_09795) sspO 1955618..1955764 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72299.44 Da        Isoelectric Point: 4.7941

>NTDB_id=567357 MKS87_RS09745 WP_173614115.1 1949172..1951175(+) (recP/tkt) [Bacillus subtilis strain YB-15]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNKVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=567357 MKS87_RS09745 WP_173614115.1 1949172..1951175(+) (recP/tkt) [Bacillus subtilis strain YB-15]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
GCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACAAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562