Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MKS87_RS09725 Genome accession   NZ_CP092631
Coordinates   1946950..1947567 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain YB-15     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1941950..1952567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKS87_RS09695 (MKS87_09695) yndJ 1942267..1943907 (+) 1641 WP_173614112.1 YndJ family protein -
  MKS87_RS09700 (MKS87_09700) - 1943995..1944309 (+) 315 WP_003245621.1 hypothetical protein -
  MKS87_RS09705 (MKS87_09705) pghL 1944534..1945292 (+) 759 WP_173614113.1 gamma-polyglutamate hydrolase PghL -
  MKS87_RS09710 (MKS87_09710) - 1945319..1945768 (-) 450 WP_003245454.1 YndM family protein -
  MKS87_RS09715 (MKS87_09715) fosB 1945977..1946411 (+) 435 WP_173614114.1 metallothiol transferase FosB -
  MKS87_RS09720 (MKS87_09720) - 1946320..1946597 (+) 278 Protein_1860 hypothetical protein -
  MKS87_RS09725 (MKS87_09725) dinR/lexA 1946950..1947567 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  MKS87_RS09730 (MKS87_09730) yneA 1947717..1948034 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  MKS87_RS09735 (MKS87_09735) dinL 1948053..1948706 (+) 654 WP_015714011.1 recombinase family protein -
  MKS87_RS09740 (MKS87_09740) ynzC 1948770..1949003 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  MKS87_RS09745 (MKS87_09745) recP/tkt 1949172..1951175 (+) 2004 WP_173614115.1 transketolase Machinery gene
  MKS87_RS09750 (MKS87_09750) sirA 1951328..1951774 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  MKS87_RS09755 (MKS87_09755) yneF 1951860..1952078 (+) 219 WP_003221221.1 YneF family protein -
  MKS87_RS09760 (MKS87_09760) ynzD 1952152..1952325 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=567356 MKS87_RS09725 WP_003238209.1 1946950..1947567(-) (dinR/lexA) [Bacillus subtilis strain YB-15]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=567356 MKS87_RS09725 WP_003238209.1 1946950..1947567(-) (dinR/lexA) [Bacillus subtilis strain YB-15]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1