Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JRY14_RS22245 Genome accession   NZ_CP074714
Coordinates   4119409..4119867 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain B13     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4114409..4124867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JRY14_RS22230 (JRY14_22200) - 4115078..4115314 (+) 237 WP_140159388.1 hypothetical protein -
  JRY14_RS22235 (JRY14_22205) - 4115476..4117584 (-) 2109 WP_000421680.1 polyphosphate kinase -
  JRY14_RS22240 (JRY14_22210) ppx 4117693..4119267 (-) 1575 WP_012593322.1 exopolyphosphatase -
  JRY14_RS22245 (JRY14_22215) kre 4119409..4119867 (+) 459 WP_000804864.1 YkyB family protein Regulator
  JRY14_RS22250 (JRY14_22220) - 4119899..4120561 (-) 663 WP_000922498.1 YkyA family protein -
  JRY14_RS22255 (JRY14_22225) - 4121176..4121829 (-) 654 WP_000680811.1 diguanylate cyclase -
  JRY14_RS22260 (JRY14_22230) - 4121993..4122226 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  JRY14_RS22265 (JRY14_22235) - 4122258..4122758 (-) 501 WP_000708120.1 hypothetical protein -
  JRY14_RS22270 (JRY14_22240) - 4123171..4124712 (+) 1542 WP_000449912.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=565984 JRY14_RS22245 WP_000804864.1 4119409..4119867(+) (kre) [Bacillus thuringiensis strain B13]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=565984 JRY14_RS22245 WP_000804864.1 4119409..4119867(+) (kre) [Bacillus thuringiensis strain B13]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATCGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493