Detailed information NTG0565842

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: IS509_RS01285
• Genome accession: NZ_CP074698
• Coordinates: 262473..263894 (-)
• Length: 473 a.a.
• NCBI ID: WP_000840544.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain X4-136
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 257473..268894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IS509_RS01270	lptG	258526..259596 (+)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-
IS509_RS01275	gpmI	259722..261269 (+)	1548	WP_000128749.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
IS509_RS01280	-	261285..262469 (+)	1185	WP_000939109.1	S41 family peptidase	-
IS509_RS01285	pilR	262473..263894 (-)	1422	WP_000840544.1	sigma-54 dependent transcriptional regulator	Regulator
IS509_RS01290	pilS	263919..265487 (-)	1569	WP_005129877.1	PAS domain-containing sensor histidine kinase	Regulator
IS509_RS01295	-	265498..266133 (-)	636	WP_000633799.1	response regulator	-
IS509_RS01300	pbpG	266346..267392 (+)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
IS509_RS01305	thrC	267499..268638 (-)	1140	WP_000063593.1	threonine synthase	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53153.34 Da
• Isoelectric Point: 6.6690

>NTDB_id=565842 IS509_RS01285 WP_000840544.1 262473..263894(-) (pilR) [Acinetobacter baumannii strain X4-136]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYTNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKLEHDATENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETPPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDTTIDISHLHPAPLRANISNPFVSATQN
IQTTVAAPQVVKKLPSEGLERYLENIEKDILINALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=565842 IS509_RS01285 WP_000840544.1 262473..263894(-) (pilR) [Acinetobacter baumannii strain X4-136]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGATGCGTGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTTAAACATGTCTCTCAAAATTATACTAATACTCCCATT
GCCGTTTTAACTGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAACTAGAGCATGATGCTACCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGCATCGCAATTAAAAAAATTGCGCGCTCA
CAAGCACCTGTATTTGTTACTGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCTAACTTAGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCAATTAACTGCGGTGCCATTCCAACCGAACTGATGGAAAGTGAGTTGTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAACAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGTGCAGTACAGGAAAAAAAGATCCGGCCCGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGACTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCACGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTGGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACGCCACCTAAACAATTAACAGAAGCAGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGCGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATA
CCACTATAGATATATCTCATTTACATCCTGCTCCTCTAAGAGCGAATATTTCTAATCCTTTTGTTTCGGCTACTCAAAAC
ATACAAACCACTGTGGCGGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTAATCAATGCCCTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGATTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	97.886	100	0.979
pilR	Pseudomonas aeruginosa PAK	50.98	97.04	0.495