Detailed information NTG0565756

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KH263_RS16780
• Genome accession: NZ_CP074685
• Coordinates: 3460262..3461425 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain VTX9
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3455262..3466425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KH263_RS16750 (KH263_16750)	-	3455527..3455946 (-)	420	WP_057080259.1	TIGR03826 family flagellar region protein	-
KH263_RS16755 (KH263_16755)	comFC	3456020..3456709 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
KH263_RS16760 (KH263_16760)	-	3456715..3456999 (-)	285	WP_057080260.1	competence protein ComFB	-
KH263_RS16765 (KH263_16765)	comFA	3457057..3458442 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
KH263_RS16770 (KH263_16770)	-	3458550..3459398 (-)	849	WP_024085866.1	DegV family protein	-
KH263_RS16775 (KH263_16775)	degU	3459496..3460185 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KH263_RS16780 (KH263_16780)	degS	3460262..3461425 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
KH263_RS16785 (KH263_16785)	-	3461647..3462294 (+)	648	WP_003151384.1	YigZ family protein	-
KH263_RS16790 (KH263_16790)	-	3462299..3463513 (+)	1215	WP_057080262.1	LCP family protein	-
KH263_RS16795 (KH263_16795)	-	3463603..3464679 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
KH263_RS16800 (KH263_16800)	-	3464812..3466008 (-)	1197	WP_079004918.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=565756 KH263_RS16780 WP_003151385.1 3460262..3461425(-) (degS) [Bacillus velezensis strain VTX9]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=565756 KH263_RS16780 WP_003151385.1 3460262..3461425(-) (degS) [Bacillus velezensis strain VTX9]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948