Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   KIH94_RS01945 Genome accession   NZ_CP074571
Coordinates   363888..364286 (-) Length   132 a.a.
NCBI ID   WP_015382736.1    Uniprot ID   -
Organism   Bacillus subtilis strain BYS2     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 358888..369286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIH94_RS01915 (KIH94_01915) yckA 359458..360138 (-) 681 WP_015382730.1 amino acid ABC transporter permease -
  KIH94_RS01920 (KIH94_01920) yckB 360148..361011 (-) 864 WP_015482776.1 transporter substrate-binding domain-containing protein -
  KIH94_RS01925 (KIH94_01925) - 361173..361370 (+) 198 WP_144052033.1 hypothetical protein -
  KIH94_RS01930 (KIH94_01930) yckC 361420..361851 (+) 432 WP_046340202.1 RDD family protein -
  KIH94_RS01935 (KIH94_01935) yckD 361933..362265 (+) 333 WP_015252849.1 YckD family protein -
  KIH94_RS01940 (KIH94_01940) bglC 362418..363851 (+) 1434 WP_015382735.1 6-phospho-beta-glucosidase -
  KIH94_RS01945 (KIH94_01945) nin/comJ 363888..364286 (-) 399 WP_015382736.1 DNA-entry nuclease inhibitor Regulator
  KIH94_RS01950 (KIH94_01950) nucA/comI 364313..364762 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  KIH94_RS01955 (KIH94_01955) tlpC 364928..366649 (-) 1722 WP_041517645.1 methyl-accepting chemotaxis protein TlpC -
  KIH94_RS01960 (KIH94_01960) hxlB 366760..367317 (-) 558 WP_015482781.1 6-phospho-3-hexuloisomerase -
  KIH94_RS01965 (KIH94_01965) hxlA 367323..367954 (-) 632 Protein_343 3-hexulose-6-phosphate synthase -
  KIH94_RS01970 (KIH94_01970) hxlR 368186..368548 (+) 363 WP_015482783.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14937.92 Da        Isoelectric Point: 5.1448

>NTDB_id=565274 KIH94_RS01945 WP_015382736.1 363888..364286(-) (nin/comJ) [Bacillus subtilis strain BYS2]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDETIKKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=565274 KIH94_RS01945 WP_015382736.1 363888..364286(-) (nin/comJ) [Bacillus subtilis strain BYS2]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAACGATTAAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTCCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962