Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SITYG_RS05445 Genome accession   NZ_AP014880
Coordinates   1074426..1074896 (-) Length   156 a.a.
NCBI ID   WP_020998594.1    Uniprot ID   -
Organism   Streptococcus intermedius strain TYG1620     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1069426..1079896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SITYG_RS05425 (SITYG_10590) - 1069459..1070010 (-) 552 WP_003072608.1 GNAT family N-acetyltransferase -
  SITYG_RS05430 (SITYG_10600) - 1070089..1071348 (-) 1260 WP_009568673.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  SITYG_RS05435 (SITYG_10610) metK 1071684..1072874 (-) 1191 WP_096362889.1 methionine adenosyltransferase -
  SITYG_RS05440 (SITYG_10620) - 1073140..1074414 (-) 1275 WP_096362890.1 dihydroorotase -
  SITYG_RS05445 (SITYG_10630) mutX 1074426..1074896 (-) 471 WP_020998594.1 NUDIX hydrolase Machinery gene
  SITYG_RS05450 (SITYG_10640) - 1074923..1075576 (-) 654 WP_009568677.1 uracil-DNA glycosylase -
  SITYG_RS05455 (SITYG_10650) - 1075601..1076587 (-) 987 WP_096362891.1 Gfo/Idh/MocA family protein -
  SITYG_RS05460 (SITYG_10660) - 1077027..1077740 (-) 714 WP_048786492.1 DUF805 domain-containing protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18175.63 Da        Isoelectric Point: 4.5298

>NTDB_id=56527 SITYG_RS05445 WP_020998594.1 1074426..1074896(-) (mutX) [Streptococcus intermedius strain TYG1620]
MVKLATICYVDNGKEFLMLHRNKKPNDVHAGKWIGVGGKLENGETPQECAVREIFEETGLRVKKPILKGIITFPEFTPNH
DWYTYVFKVTEFEGELIDCDEGTLEWVPYEQVLSRPTWEGDLTFISWILEERPFFSAKFSYKGETLVESHVDFYED

Nucleotide


Download         Length: 471 bp        

>NTDB_id=56527 SITYG_RS05445 WP_020998594.1 1074426..1074896(-) (mutX) [Streptococcus intermedius strain TYG1620]
ATGGTTAAATTAGCAACGATTTGCTATGTGGACAATGGAAAAGAATTTCTGATGTTACATCGAAATAAAAAGCCCAATGA
TGTCCATGCTGGCAAGTGGATTGGTGTTGGTGGAAAATTAGAAAATGGCGAAACACCACAGGAGTGTGCTGTCCGAGAAA
TCTTTGAAGAGACGGGATTGCGCGTGAAAAAGCCGATATTAAAAGGTATTATCACTTTTCCAGAGTTTACACCGAACCAT
GACTGGTACACTTATGTATTTAAAGTGACAGAGTTTGAGGGAGAACTGATTGACTGCGATGAAGGTACTTTAGAATGGGT
ACCTTATGAACAAGTTCTATCTAGACCAACTTGGGAGGGAGATCTTACTTTTATATCTTGGATTTTAGAAGAAAGACCGT
TTTTCTCGGCCAAATTTTCTTACAAAGGAGAGACGTTAGTGGAGAGCCATGTTGATTTTTATGAAGATTAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(5-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

78.065

99.359

0.776

Multiple sequence alignment