Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LXM97_RS05730 Genome accession   NZ_CP092447
Coordinates   1207629..1208915 (+) Length   428 a.a.
NCBI ID   WP_000121121.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SYN     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1202629..1213915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXM97_RS05700 (LXM97_05700) - 1203024..1203137 (+) 114 WP_031845108.1 hypothetical protein -
  LXM97_RS05705 (LXM97_05705) tsf 1203172..1204053 (+) 882 WP_000201386.1 translation elongation factor Ts -
  LXM97_RS05710 (LXM97_05710) pyrH 1204190..1204912 (+) 723 WP_000057330.1 UMP kinase -
  LXM97_RS05715 (LXM97_05715) frr 1204931..1205485 (+) 555 WP_001280006.1 ribosome recycling factor -
  LXM97_RS05720 (LXM97_05720) - 1205858..1206628 (+) 771 WP_000473705.1 isoprenyl transferase -
  LXM97_RS05725 (LXM97_05725) - 1206635..1207417 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  LXM97_RS05730 (LXM97_05730) eeP 1207629..1208915 (+) 1287 WP_000121121.1 RIP metalloprotease RseP Regulator
  LXM97_RS05735 (LXM97_05735) - 1208935..1210638 (+) 1704 WP_000814107.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48150.53 Da        Isoelectric Point: 9.5201

>NTDB_id=565129 LXM97_RS05730 WP_000121121.1 1207629..1208915(+) (eeP) [Staphylococcus aureus strain SYN]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVYGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=565129 LXM97_RS05730 WP_000121121.1 1207629..1208915(+) (eeP) [Staphylococcus aureus strain SYN]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATTACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACTTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTCTTCAAACCAATTGTATATGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTCGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCAGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATCGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395