Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   MCU78_RS14190 Genome accession   NZ_CP092051
Coordinates   3327630..3328763 (+) Length   377 a.a.
NCBI ID   WP_185942240.1    Uniprot ID   -
Organism   Streptomyces sp. TYQ1024     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3322630..3333763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MCU78_RS14180 (MCU78_14180) - 3323560..3325389 (-) 1830 WP_185942238.1 hypothetical protein -
  MCU78_RS14185 (MCU78_14185) radA/sms 3326015..3327532 (+) 1518 WP_185942239.1 DNA repair protein RadA Machinery gene
  MCU78_RS14190 (MCU78_14190) disA 3327630..3328763 (+) 1134 WP_185942240.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  MCU78_RS14195 (MCU78_14195) - 3328839..3329684 (-) 846 WP_313772150.1 hypothetical protein -
  MCU78_RS14200 (MCU78_14200) - 3329887..3330423 (-) 537 WP_185942242.1 pyridoxamine 5'-phosphate oxidase -
  MCU78_RS14205 (MCU78_14205) - 3330512..3330685 (-) 174 WP_185942243.1 hypothetical protein -
  MCU78_RS14210 (MCU78_14210) - 3330928..3331854 (+) 927 WP_224347045.1 A/G-specific adenine glycosylase -
  MCU78_RS14215 (MCU78_14215) - 3332062..3332610 (+) 549 WP_004949546.1 SigE family RNA polymerase sigma factor -
  MCU78_RS14220 (MCU78_14220) - 3332598..3333284 (+) 687 WP_185942244.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 40424.25 Da        Isoelectric Point: 5.0097

>NTDB_id=564647 MCU78_RS14190 WP_185942240.1 3327630..3328763(+) (disA) [Streptomyces sp. TYQ1024]
MAANDRASGPGRAGGGSGGSHADGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGMDKTVDSMCTGGFVLDVEFSAT
RLRELCKLDGALILDKDITKIVRAGVQLVPDASIPTEETGTRHRTAQRVSIQCGFPVVSVSQSMRLIALYVDGERRVLEE
SGAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDE
LIAGVEPERDLVVRDYVPEPTAKRTRTVPEALAELDSLTHTELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRL
PGAIIERLVEHFGGLQKLLAASVDDLQAVEGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=564647 MCU78_RS14190 WP_185942240.1 3327630..3328763(+) (disA) [Streptomyces sp. TYQ1024]
GTGGCAGCCAACGACCGGGCATCGGGCCCCGGCAGGGCCGGGGGCGGCTCCGGTGGCTCCCATGCCGACGGGCTGATGCG
CGCCTCGCTGAGCGCCGTCGCGCCCGGCACGGCCCTGCGCGACGGCCTTGAGCGCGTTCTTCGCGGCAATACGGGCGGGC
TCATCGTCCTCGGCATGGACAAGACCGTCGACTCGATGTGCACCGGCGGTTTCGTCCTCGACGTGGAGTTCAGCGCGACC
AGGCTCCGTGAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATCACCAAGATCGTCCGGGCGGGCGTGCA
GCTCGTGCCGGACGCGTCGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGCAGCGGGTCTCCATCCAGTGCG
GCTTCCCCGTCGTCTCCGTGAGCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGCGTGCTGGAGGAG
TCCGGCGCGATCCTGTCCCGCGCCAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTGGCCGG
CACGCTCTCCGCCCTGGAGATCGAGGATCTGGTCACGGTCCGGGACGTCACGGCGGTCTCGCAGCGCCTGGAGATGGTGC
GGCGCATCGCCACGGAGATCGCCGAGTACGTCGTCGAACTGGGTACCGACGGGCGCCTGCTCTCCCTCCAGCTGGACGAG
TTGATCGCGGGCGTGGAGCCGGAGCGCGACCTGGTGGTCCGGGACTACGTCCCCGAGCCGACCGCCAAGCGCACCCGGAC
GGTCCCCGAGGCGCTCGCCGAGCTCGACTCGCTCACCCACACCGAGCTCCTCGAACTGCCCATCGTGGCGCGGGCCCTGG
GCTACAGCGGCTCGCCGGAGACGCTGGACTCGGCCGTCTCGCCGCGCGGCTACCGCCTGCTGGCGAAGGTGCCGCGGCTG
CCCGGCGCGATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTCCA
GGCCGTGGAGGGCGTCGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCGTCGATCCTGG
AGCGGTACGTGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.688

91.777

0.438