Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   KGS74_RS01535 Genome accession   NZ_CP074377
Coordinates   315928..317169 (+) Length   413 a.a.
NCBI ID   WP_049169461.1    Uniprot ID   -
Organism   Lacticaseibacillus casei strain FBL6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 310928..322169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGS74_RS01510 (KGS74_01510) tsf 311363..312244 (+) 882 WP_047106254.1 translation elongation factor Ts -
  KGS74_RS01515 (KGS74_01515) pyrH 312471..313190 (+) 720 WP_010488080.1 UMP kinase -
  KGS74_RS01520 (KGS74_01520) frr 313190..313747 (+) 558 WP_010488081.1 ribosome recycling factor -
  KGS74_RS01525 (KGS74_01525) - 314335..315087 (+) 753 WP_049169462.1 isoprenyl transferase -
  KGS74_RS01530 (KGS74_01530) - 315123..315911 (+) 789 WP_010488089.1 phosphatidate cytidylyltransferase -
  KGS74_RS01535 (KGS74_01535) eeP 315928..317169 (+) 1242 WP_049169461.1 RIP metalloprotease RseP Regulator
  KGS74_RS01540 (KGS74_01540) - 317193..318923 (+) 1731 WP_049169460.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45292.96 Da        Isoelectric Point: 8.0451

>NTDB_id=564430 KGS74_RS01535 WP_049169461.1 315928..317169(+) (eeP) [Lacticaseibacillus casei strain FBL6]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDDEDDIKPG
TMLSLILNDAGKVVRINASDKTTLEGGMPVQVSRVDLVKDLVIEGYPNGDEDALQSWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFILAILTFIIYGLIFGVQILNTNQVGTVLPDYPAAQAGLKSNARVESIDGKKIHSFTDL
STQVSKHAGKSVMFTVKQDGKTQNIAIKPDKKGKIGVMVPVEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLAGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=564430 KGS74_RS01535 WP_049169461.1 315928..317169(+) (eeP) [Lacticaseibacillus casei strain FBL6]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGCAGCGGTATTCTGGTGCGTGAATTTTCGATTGGCATGGGTCCGAAGCTTTGGGCGTCACATAAGAATAATACGACCT
ACACATTGCGCCTGTTGCCACTGGGCGGTTATGTGCGTATGGCAGGCTGGCAGGACGATGAAGATGATATCAAACCAGGC
ACGATGCTGAGCTTGATTTTGAACGATGCCGGTAAAGTTGTCCGCATTAATGCCAGTGACAAAACAACATTAGAAGGCGG
CATGCCGGTTCAGGTCAGTCGCGTCGATTTGGTCAAGGACCTTGTCATCGAAGGTTATCCGAATGGTGATGAAGATGCCT
TGCAAAGTTGGCAGGTTGATCATGACGCCACTATCATCGAAGAAGATGGCACAGAAGTCCAGATTGCGCCGGAAGACGTG
CAATTTCAAAATGCACCGGTTTGGCGGCGGCTCTTGGTCAATTTTGCCGGACCGATGAATAACTTTATTCTCGCTATTTT
GACGTTCATCATTTATGGCCTGATTTTTGGTGTGCAGATTTTGAATACCAATCAGGTTGGAACCGTTCTTCCCGATTATC
CGGCTGCTCAAGCAGGACTTAAATCGAATGCTAGGGTTGAATCCATCGATGGTAAGAAGATTCATTCATTTACGGATCTT
TCAACACAGGTCAGCAAACATGCCGGCAAATCAGTCATGTTTACTGTCAAGCAGGATGGCAAAACACAAAATATTGCGAT
TAAACCGGATAAGAAAGGTAAGATTGGCGTGATGGTGCCCGTTGAGAAGTCACCGGCGCGCGCCTTTACTTATGGGTTTA
CCCAGACATGGGACCTAGCTGTTCGCACATGGGATGTCTTGAAGTCAATGGTCACTGGTGGTTTTTCACTTAATAAGCTC
GCCGGACCAGTCGGTATTTATACTATGACCAGCCAAAGTGCTAAAGGTGGACTGGCTGGCTTGTTGTTCTTCATGGGTTA
CCTAAGCCTTGGTTTGGGCATTTCCAACCTACTGCCGATTCCGGTCTTGGACGGCGGGAAAATTCTATTAAACCTGATCG
AAATCATTCGGCGCAAGCCACTCAAACCGGAAACTGAAGGTGTGGTCACGATGATCGGTCTGGGTTTGATGGTCTTGTTG
ATGCTCGCCGTCACGATTAATGACATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(206-268)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.826

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.706

100

0.501