Detailed information NTG0564155

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: MA544_RS06715
• Genome accession: NZ_CP092017
• Coordinates: 1284224..1285564 (-)
• Length: 446 a.a.
• NCBI ID: WP_052786514.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 15065A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1279224..1290564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MA544_RS06690 (MA544_06690)	-	1279361..1280131 (+)	771	WP_002855781.1	MetQ/NlpA family ABC transporter substrate-binding protein	-
MA544_RS06695 (MA544_06695)	metE	1280143..1282407 (+)	2265	WP_057035854.1	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	-
MA544_RS06700 (MA544_06700)	metF	1282417..1283265 (+)	849	WP_002858469.1	methylenetetrahydrofolate reductase [NAD(P)H]	-
MA544_RS06705 (MA544_06705)	-	1283287..1283478 (-)	192	WP_002852856.1	membrane protein	-
MA544_RS06710 (MA544_06710)	atpB	1283475..1284155 (-)	681	WP_052786513.1	F0F1 ATP synthase subunit A	-
MA544_RS06715 (MA544_06715)	radA	1284224..1285564 (-)	1341	WP_052786514.1	DNA repair protein RadA	Machinery gene
MA544_RS06720 (MA544_06720)	pilA	1285564..1286430 (-)	867	WP_002852840.1	signal recognition particle-docking protein FtsY	Machinery gene
MA544_RS06725 (MA544_06725)	-	1286430..1286987 (-)	558	WP_002869638.1	TlpA disulfide reductase family protein	-
MA544_RS06730 (MA544_06730)	-	1287070..1287696 (+)	627	WP_002860439.1	5-formyltetrahydrofolate cyclo-ligase	-
MA544_RS06735 (MA544_06735)	rny	1287617..1289170 (+)	1554	WP_057035853.1	ribonuclease Y	-
MA544_RS06740 (MA544_06740)	-	1289179..1289736 (+)	558	WP_002852823.1	DedA family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49068.97 Da
• Isoelectric Point: 6.9290

>NTDB_id=564155 MA544_RS06715 WP_052786514.1 1284224..1285564(-) (radA) [Campylobacter jejuni subsp. jejuni strain 15065A]
MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFVELKAEQIKVLKELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDL
VLGGGLVEGSLVLIGGSPGVGKSTLLLKIASNLAKQGKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
LHKKDYSILIVDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITKEGAIAGPRVLEHMVDVVLYFEG
EATKEIRLLRGFKNRFGGTNEVGIFEMTTKGLISAKDLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKR
SATGYEKNRLDMLLALLERKLEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGELSLNGEIRE
VFSLDTRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM

Nucleotide

• Length: 1341 bp

>NTDB_id=564155 MA544_RS06715 WP_052786514.1 1284224..1285564(-) (radA) [Campylobacter jejuni subsp. jejuni strain 15065A]
ATGGCAAAAAATAAAGCACTTTTTGAATGTCAAGCTTGTGGAAATCAACAAAGCAAATGGCTTGGAAAATGTCCTGATTG
TGGAGCTTGGGATAGTTTTGTAGAATTAAAAGCTGAGCAAATTAAAGTTTTAAAAGAGCTTGCGCAAGTTAGTATGAAAA
CAAGTGAAGCTGTTTGTATTGAAGATGTGGAATTAGAACATTTTACAAGATACAGCACAGATGATAATGAGCTTGATTTG
GTTTTAGGCGGAGGGCTTGTTGAAGGTTCTTTAGTGCTTATAGGCGGAAGTCCAGGTGTGGGAAAATCTACGCTTTTGTT
AAAAATTGCTTCAAATTTAGCCAAACAGGGTAAAAAAGTGCTTTATGTCAGTGGCGAAGAAAGTAAAGCTCAGATTAAAT
TAAGAGCTGATCGCCTTGAGGCTAATACTCCGAATTTATTTTTACTTACTGAACTTTGCCTTGAAAATATTTTAGAAGAA
TTGCACAAAAAAGATTATAGCATTCTTATCGTTGATTCTATACAAACTCTATATTCAAATAAAATCACTTCAGCAGCAGG
AAGCATCACTCAGGTGCGTGAGATTACTTTTGAACTTATGCGTGTTAGCAAGGCTTATAATATCAGTACTTTTATCATAG
GGCATATTACTAAAGAAGGTGCTATAGCAGGGCCTAGGGTTCTTGAGCATATGGTAGATGTGGTGCTTTATTTTGAAGGA
GAAGCCACTAAAGAAATCAGACTTTTAAGAGGCTTTAAAAATCGTTTTGGTGGAACGAATGAAGTAGGTATTTTTGAGAT
GACTACTAAGGGTTTGATCAGTGCAAAAGATTTGGCAAATCGTTTTTTTACTCGTGGAAAGGCTATTTCAGGAAGTGCTT
TAGGTGTTGTGATGGAAGGATCTCGTGCTTTGGTTTTAGAAGTTCAAGCTTTAGTGTGTGAAAGTTCTTATCCAAAACGT
AGCGCTACAGGGTATGAAAAAAATCGCTTAGATATGCTTTTGGCTTTGCTTGAAAGAAAACTTGAAATTCCTTTAGGGCA
TTATGATGTATTTGTAAATATTAGCGGCGGAGTAAAAGTAAGTGAAACTGCTGCGGATTTAGCTGTGGTTGCAGCTATTA
TTTCAAGTTTTAAAAATCGCCCTTTGAGTAAAGATAGTATTTTTATAGGAGAACTTAGTTTAAATGGAGAAATTAGAGAG
GTTTTTAGCCTTGATACGCGTTTAAAAGAAGCTAAAATGCAAAAATTTAAAAATGCTATTGTTCCTTCTAAGCCTTTGGA
AGATATAGGGCTTAAGTGTTTTGTTGCTAAAGAACTTTCGCAAGTTTTAGAATGGATGTAA

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (347-423)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (71-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae R6	46.085	100	0.462
radA	Streptococcus pneumoniae Rx1	46.085	100	0.462
radA	Streptococcus pneumoniae D39	46.085	100	0.462
radA	Streptococcus pneumoniae TIGR4	46.085	100	0.462
radA	Streptococcus mitis SK321	46.067	99.776	0.46
radA	Streptococcus mitis NCTC 12261	46.067	99.776	0.46
radA/sms	Bacillus subtilis subsp. subtilis str. 168	47.126	97.534	0.46