Detailed information NTG0563744

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L7H22_RS15595
• Genome accession: NZ_CP091839
• Coordinates: 3222747..3223772 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain SWYHX138.261ft
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3217747..3228772

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L7H22_RS15565 (L7H22_15565)	zapB	3217831..3218076 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
L7H22_RS15570 (L7H22_15570)	rraA	3218161..3218646 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L7H22_RS15575 (L7H22_15575)	menA	3218739..3219665 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L7H22_RS15580 (L7H22_15580)	hslU	3219732..3221063 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
L7H22_RS15585 (L7H22_15585)	hslV	3221073..3221603 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L7H22_RS15590 (L7H22_15590)	ftsN	3221696..3222655 (-)	960	WP_000068828.1	cell division protein FtsN	-
L7H22_RS15595 (L7H22_15595)	cytR	3222747..3223772 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L7H22_RS15600 (L7H22_15600)	priA	3223928..3226126 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
L7H22_RS15605 (L7H22_15605)	rpmE	3226329..3226541 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
L7H22_RS15610 (L7H22_15610)	yiiX	3226602..3227210 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
L7H22_RS15615 (L7H22_15615)	metJ	3227394..3227711 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=563744 L7H22_RS15595 WP_000644904.1 3222747..3223772(-) (cytR) [Escherichia coli strain SWYHX138.261ft]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=563744 L7H22_RS15595 WP_000644904.1 3222747..3223772(-) (cytR) [Escherichia coli strain SWYHX138.261ft]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628