Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BAM5036_RS05485 Genome accession   NC_020410
Coordinates   1073828..1074019 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis UCMB5036     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1068828..1079019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAM5036_RS05450 (BAM5036_1025) argF 1069680..1070651 (+) 972 WP_015417202.1 ornithine carbamoyltransferase -
  BAM5036_RS05455 (BAM5036_1026) - 1070727..1070906 (+) 180 WP_003155070.1 YjzC family protein -
  BAM5036_RS05460 (BAM5036_1027) - 1070943..1071128 (-) 186 WP_003155069.1 YjzD family protein -
  BAM5036_RS05470 (BAM5036_1028) - 1071389..1072123 (+) 735 WP_015417203.1 hypothetical protein -
  BAM5036_RS05475 (BAM5036_1029) - 1072206..1072772 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  BAM5036_RS05480 (BAM5036_1030) med 1072862..1073815 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  BAM5036_RS05485 (BAM5036_1031) comZ 1073828..1074019 (+) 192 WP_003155061.1 ComZ family protein Regulator
  BAM5036_RS05490 (BAM5036_1032) - 1074048..1074266 (-) 219 WP_007409123.1 hypothetical protein -
  BAM5036_RS05495 (BAM5036_1033) - 1074433..1075371 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BAM5036_RS05500 (BAM5036_1034) fabF 1075394..1076632 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  BAM5036_RS05505 (BAM5036_1035) - 1076716..1077501 (+) 786 WP_007409120.1 DUF2268 domain-containing protein -
  BAM5036_RS05510 (BAM5036_1036) - 1077675..1078661 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=56359 BAM5036_RS05485 WP_003155061.1 1073828..1074019(+) (comZ) [Bacillus velezensis UCMB5036]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=56359 BAM5036_RS05485 WP_003155061.1 1073828..1074019(+) (comZ) [Bacillus velezensis UCMB5036]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment