Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   KFQ09_RS17690 Genome accession   NZ_CP074101
Coordinates   3436995..3438728 (+) Length   577 a.a.
NCBI ID   WP_035390783.1    Uniprot ID   -
Organism   Bacillus sp. FS02     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3431995..3443728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFQ09_RS17665 - 3432099..3432359 (+) 261 WP_003215880.1 exodeoxyribonuclease VII small subunit -
  KFQ09_RS17670 - 3432343..3433239 (+) 897 WP_253207799.1 polyprenyl synthetase family protein -
  KFQ09_RS17675 dxs 3433391..3435292 (+) 1902 WP_007501165.1 1-deoxy-D-xylulose-5-phosphate synthase -
  KFQ09_RS17680 - 3435289..3436143 (+) 855 WP_007501164.1 TlyA family RNA methyltransferase -
  KFQ09_RS17685 ahrC 3436511..3436960 (+) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  KFQ09_RS17690 recN 3436995..3438728 (+) 1734 WP_035390783.1 DNA repair protein RecN Machinery gene
  KFQ09_RS17695 spoIVB 3438927..3440204 (+) 1278 WP_255835851.1 SpoIVB peptidase -
  KFQ09_RS17700 spo0A 3440488..3441291 (+) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  KFQ09_RS17705 - 3441742..3442842 (+) 1101 WP_255835852.1 Rap family tetratricopeptide repeat protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 64571.46 Da        Isoelectric Point: 4.7444

>NTDB_id=563294 KFQ09_RS17690 WP_035390783.1 3436995..3438728(+) (recN) [Bacillus sp. FS02]
MLAELTIKNFAIIEELTVSFEKGLTVLTGETGAGKSIMIDAVSLLVGGRGSSEFVRYGEKKAELEGLFLVPADHPVFALC
EEQGIDASDEMMILRRDINQSGKSICRINGKLVTISLLREVGRLLLDIHGQHDNQLLMEDENHLHLLDQFGAEEIAPALS
QYQEAYDQYMKTAQKLKQLSENEQEMVHRLDLLQFQLEEIEAAQLEPGEDEKLQEERHQISNFEKIFSSLQNAYNALRNE
QGGLDWVGMASSELEQVSEINDDLKKLSEQVSNSYYLLEDSTFQMRSMLDQLEFDPARLDFIESRLNEMKQLKRKYGTTV
EEILEYAAKIEEEIDQIQNRDSHLQTLKNKLDAISRDALLEALNVSELRKKWAKKLAKHIQAELKDLYMEKSSFDTAFSI
RYAPFGSTDCPLLDGKPVQLGKNGIDQAQFVISTNPGEPMKSLSKVASGGEISRVMLAVKSIFSAKQEVTSIIFDEVDTG
VSGRVAQAIAEKIYKVAAGSQVLCITHLPQVAAMADTHLFISKRAKAGRTMTNVKPLSDDEKVSEIGRMIAGVEVTELTK
QHAKELLHQANDVKTTG

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=563294 KFQ09_RS17690 WP_035390783.1 3436995..3438728(+) (recN) [Bacillus sp. FS02]
GTGTTAGCAGAACTAACCATTAAAAACTTTGCAATCATTGAGGAGTTAACGGTTTCGTTTGAAAAAGGACTCACAGTTCT
AACAGGGGAAACAGGTGCCGGAAAATCAATCATGATTGACGCTGTCTCACTTCTCGTAGGGGGAAGAGGATCATCCGAAT
TTGTCCGTTATGGTGAAAAAAAAGCAGAGCTGGAAGGTCTTTTTCTTGTACCAGCAGATCATCCTGTATTTGCTCTTTGC
GAGGAGCAAGGAATTGATGCATCTGATGAAATGATGATTCTTCGCCGTGATATCAATCAAAGCGGGAAAAGCATTTGCCG
CATTAATGGTAAGCTTGTCACCATCTCGCTTTTAAGAGAAGTTGGCCGGCTTTTGCTTGATATACATGGACAGCACGATA
ATCAGCTGTTAATGGAAGATGAAAATCATTTACATTTGCTTGATCAATTTGGAGCAGAAGAAATTGCACCTGCTCTCTCG
CAGTATCAAGAAGCGTATGATCAATATATGAAGACGGCGCAAAAACTCAAACAGCTGTCTGAAAATGAACAGGAAATGGT
TCACCGGTTAGACTTATTGCAATTTCAGCTGGAAGAGATTGAAGCGGCACAATTAGAGCCTGGGGAAGATGAGAAGCTTC
AAGAGGAACGTCATCAAATCAGCAATTTTGAAAAAATCTTTTCCTCACTTCAAAACGCATATAATGCTCTGCGTAATGAG
CAGGGAGGACTTGATTGGGTTGGGATGGCTTCAAGCGAGCTTGAGCAAGTTTCTGAGATCAACGACGATCTGAAAAAGCT
CTCTGAGCAAGTGTCAAACTCCTATTATTTATTAGAAGATTCTACTTTTCAAATGCGCAGCATGCTTGATCAATTAGAAT
TTGACCCAGCCCGTCTTGATTTTATTGAGTCTAGACTAAATGAGATGAAGCAGCTGAAGCGAAAATACGGCACAACCGTT
GAGGAAATTTTAGAATATGCGGCTAAGATTGAAGAGGAGATAGACCAAATCCAAAATCGAGACAGCCATTTGCAGACACT
TAAAAACAAACTTGATGCGATAAGCCGGGATGCATTGCTTGAAGCGCTTAACGTGTCAGAGCTCCGTAAAAAATGGGCGA
AAAAACTGGCGAAGCACATTCAAGCTGAATTGAAGGATTTATATATGGAGAAGTCTTCTTTTGATACCGCTTTTTCGATT
CGATATGCACCTTTTGGCAGTACGGACTGCCCGCTTTTAGATGGAAAACCCGTACAGCTCGGGAAAAACGGCATAGATCA
AGCGCAATTTGTCATTTCAACAAATCCGGGTGAACCGATGAAATCTTTGTCAAAAGTAGCATCTGGAGGAGAAATTTCAC
GTGTCATGCTGGCAGTGAAAAGTATTTTCTCAGCGAAACAAGAAGTGACGTCCATTATATTTGATGAAGTGGATACGGGC
GTTAGCGGCAGAGTCGCACAAGCCATTGCTGAAAAAATTTATAAAGTAGCAGCAGGCTCACAAGTACTCTGTATTACCCA
TCTGCCGCAAGTCGCAGCAATGGCTGATACACATCTTTTTATTTCTAAACGCGCTAAAGCTGGCAGAACAATGACGAACG
TCAAACCACTCAGTGATGATGAAAAAGTGAGTGAAATTGGCCGAATGATTGCTGGTGTAGAAGTCACTGAGCTCACAAAA
CAGCATGCAAAAGAATTACTGCACCAAGCAAATGATGTCAAAACGACAGGGTAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-524)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

75.737

100

0.757